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sw_8_scaffold_2078

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2078_1
unknown

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comp(167..349)
DNA (183bp) protein (61aa)

This feature has no annotations

sw_8_scaffold_2078_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(617..1336)
DNA (720bp) protein (240aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9A7_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
sw_8_scaffold_2078_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1834..2553
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_8_scaffold_2078_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2688..3149
DNA (462bp) protein (154aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_8_scaffold_2078_5
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3299..3997
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1M9_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ17181.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
short-chain dehydrogenase/reductase SDR
sw_8_scaffold_2078_6
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4143..4802)
DNA (660bp) protein (220aa)
Response regulator n=6 Tax=Haloferax RepID=L5NYI0_9EURY
Sensor histidine kinase TmoS {ECO:0000313|EMBL:CQR50244.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
response regulator
sw_8_scaffold_2078_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4954..5781
DNA (828bp) protein (276aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH39119.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AEH39119.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales;
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDL7_HALXS
sw_8_scaffold_2078_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5818..6852
DNA (1035bp) protein (345aa)
HTR-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGQ1_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ22470.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
multi-sensor signal transduction histidine kinase
sw_8_scaffold_2078_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7010..8131)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F762_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55042.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_2078_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8134..9315)
DNA (1182bp) protein (394aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=931277 species="Arc
pri1; DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC27_HALMO
sw_8_scaffold_2078_11
unknown

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9574..9771
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 11 items

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