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sw_9_scaffold_102

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_102_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..721
DNA (720bp) protein (240aa)
Transcriptional regulator n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KTE5_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA24208.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JC
hypothetical protein
sw_9_scaffold_102_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

718..1119
DNA (402bp) protein (134aa)
Cupin n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LN69_HALJP
Cupin {ECO:0000313|EMBL:EMA33480.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
cupin 2 barrel domain-containing protein
sw_9_scaffold_102_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1319..2278
DNA (960bp) protein (320aa)
apl; AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein (EC:4.2.99.18)
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAK6_9EURY
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein {ECO:0000313|EMBL:EMA53690.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
sw_9_scaffold_102_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2447..4213)
DNA (1767bp) protein (589aa)
ABC transporter integral membrane protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7Z6_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:ELZ30279.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
ABC transporter integral membrane protein
sw_9_scaffold_102_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4331..5188)
DNA (858bp) protein (286aa)
RbsA2 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5Z1_9EURY
RbsA2 {ECO:0000313|EMBL:ELZ30278.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
RbsA2
sw_9_scaffold_102_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5192..6529)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6F2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30277.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_102_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

6688..7536
DNA (849bp) protein (283aa)
Putative sugar phosphate isomerase/epimerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCN9_HALJB
putative sugar phosphate isomerase/epimerase Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
putative sugar phosphate isomerase/epimerase
sw_9_scaffold_102_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7824..8588
DNA (765bp) protein (255aa)
ArcR family transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ37_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:ELZ28480.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
arcR14; ArcR family transcription regulator
sw_9_scaffold_102_9
unknown

Not on your lists

8717..9088
DNA (372bp) protein (124aa)

This feature has no annotations

sw_9_scaffold_102_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9483..10238
DNA (756bp) protein (252aa)
F420-0--gamma-glutamyl ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLH4_9EURY
F420-0--gamma-glutamyl ligase {ECO:0000313|EMBL:EMA45310.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
F420-0--gamma-glutamyl ligase
sw_9_scaffold_102_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10225..11205
DNA (981bp) protein (327aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
mer; 5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYY6_9EURY
sw_9_scaffold_102_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11159..11380)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45312.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_102_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11461..11676
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1G0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50944.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_9_scaffold_102_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11749..12096
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45314.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_9_scaffold_102_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12120..12515)
DNA (396bp) protein (132aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2M1_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA50945.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
sw_9_scaffold_102_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13219..13731)
DNA (513bp) protein (171aa)
Putative Hsp20 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKH6_9EURY
Putative Hsp20 {ECO:0000313|EMBL:EMA44940.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.
heat shock protein 20
sw_9_scaffold_102_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13728..13886)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N718_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53727.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_102_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14369..16102
DNA (1734bp) protein (578aa)
Radical SAM protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N826_9EURY
Radical SAM protein {ECO:0000313|EMBL:EMA53728.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
putative Fe-S oxidoreductase
sw_9_scaffold_102_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16208..16606
DNA (399bp) protein (133aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9E5_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA53729.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
ArsR family transcriptional regulator
sw_9_scaffold_102_20
unknown

Not on your lists

16603..16725
DNA (123bp) protein (41aa)

This feature has no annotations

sw_9_scaffold_102_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16775..17134
DNA (360bp) protein (120aa)
Arsenate reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N780_9EURY
Arsenate reductase {ECO:0000313|EMBL:EMA53731.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
protein-tyrosine phosphatase, low molecular weight
sw_9_scaffold_102_22
unknown

Not on your lists

17240..17881
DNA (642bp) protein (214aa)

This feature has no annotations

sw_9_scaffold_102_23
Caenorhabditis elegans, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

18004..19005
DNA (1002bp) protein (334aa)
hypothetical protein
Location of vulva defective 1; Polycystic kidney disease 1 protein homolog; Polycystin-1; Flags: Precursor;; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabd
sw_9_scaffold_102_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19094..20899
DNA (1806bp) protein (602aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_102_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21299..21898)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N189_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50445.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_102_26
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21951..24035)
DNA (2085bp) protein (695aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420, ECO:0000
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZTH0_9EURY
phosphoribosylformylglycinamidine synthase
sw_9_scaffold_102_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24388..25074
DNA (687bp) protein (229aa)
Phosphotransferase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLR7_9EURY
Phosphotransferase domain-containing protein {ECO:0000313|EMBL:EMA45390.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
phosphotransferase domain-containing protein
sw_9_scaffold_102_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25222..26292
DNA (1071bp) protein (357aa)
phytoene/squalene synthetase (EC:2.5.1.21)
Squalene/phytoene synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYQ6_9EURY
Squalene/phytoene synthase {ECO:0000313|EMBL:EMA50448.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
sw_9_scaffold_102_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26344..26820)
DNA (477bp) protein (159aa)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N036_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA50449.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mutT; mutT/NUDIX family protein
sw_9_scaffold_102_30
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26884..27585)
DNA (702bp) protein (234aa)
Transcription factor TFIIB cyclin-related protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NM15_9EURY
Transcription factor TFIIB cyclin-related protein {ECO:0000313|EMBL:EMA58987.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
tfb1; transcription initiation factor TFB
Displaying 30 items

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