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sw_9_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_342_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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212..796
DNA (585bp) protein (195aa)
Ferredoxin 2Fe-2S n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF3_9EURY
Ferredoxin 2Fe-2S {ECO:0000313|EMBL:EMA55647.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
ferredoxin
sw_9_scaffold_342_2
unknown

Not on your lists

comp(751..999)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_9_scaffold_342_trna_1
unknown

Not on your lists

853..925
DNA (73bp)
transferRNA
sw_9_scaffold_342_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1120..3084)
DNA (1965bp) protein (655aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1227455 species="Archaea; Eur
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN25_9EURY
sw_9_scaffold_342_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3206..3556)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEX4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55644.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_342_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3646..3789)
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRQ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92673.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_9_scaffold_342_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4054..4653
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46786.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_342_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4664..5347
DNA (684bp) protein (228aa)
ArsR family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCS2_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA55641.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
conditioned medium-induced protein 2
sw_9_scaffold_342_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5370..5936)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55640.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_342_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5987..7420
DNA (1434bp) protein (478aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEW9_9EURY
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EMA55639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NADH:flavin oxidoreductase/NADH oxidase
sw_9_scaffold_342_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7602..7892
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQN0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46790.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_9_scaffold_342_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7959..9242
DNA (1284bp) protein (428aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457}; Short=Glu-ADT subunit D {ECO:0000256|HAMAP-Rule:MF_00586};; EC=6.3.5.- {ECO:0000256|HAMA
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDK5_9EURY
glutamyl-tRNA(Gln) amidotransferase
sw_9_scaffold_342_12
unknown

Not on your lists

comp(9193..9945)
DNA (753bp) protein (251aa)

This feature has no annotations

sw_9_scaffold_342_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10470..10640)
DNA (171bp) protein (57aa)
Xaa-Pro aminopeptidase, M24 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN36_9EURY
Xaa-Pro aminopeptidase, M24 family protein {ECO:0000313|EMBL:EMA46793.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
peptidase
sw_9_scaffold_342_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10580..11404)
DNA (825bp) protein (275aa)
Xaa-Pro aminopeptidase, M24 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN36_9EURY
Xaa-Pro aminopeptidase, M24 family protein {ECO:0000313|EMBL:EMA46793.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_9_scaffold_342_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11560..12210)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55635.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_9_scaffold_342_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12361..12957)
DNA (597bp) protein (199aa)
IclR family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEW6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:EMA55634.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
IclR family transcriptional regulator
sw_9_scaffold_342_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12954..13124)
DNA (171bp) protein (57aa)
IclR family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQN6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:EMA46795.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
sw_9_scaffold_342_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13322..14350)
DNA (1029bp) protein (343aa)
Proline racemase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG13_9EURY
Proline racemase {ECO:0000313|EMBL:EMA55625.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
proline racemase
sw_9_scaffold_342_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14532..15689
DNA (1158bp) protein (386aa)
FAD dependent oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEV9_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EMA55624.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
glycine/D-amino acid oxidase, deaminating
sw_9_scaffold_342_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15744..16532
DNA (789bp) protein (263aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM98_9EURY
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EMA46801.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
short-chain dehydrogenase/reductase SDR
sw_9_scaffold_342_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16625..16984
DNA (360bp) protein (120aa)
Cupin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEV3_9EURY
Cupin {ECO:0000313|EMBL:EMA55619.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
cupin
sw_9_scaffold_342_22
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17037..18341)
DNA (1305bp) protein (435aa)
Class III aminotransferase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AQW0_9EURY
Class III aminotransferase {ECO:0000313|EMBL:ELY91784.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10
class III aminotransferase
sw_9_scaffold_342_23
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18524..20002
DNA (1479bp) protein (493aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W1D1_9EURY
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELY43304.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubru
methylmalonate-semialdehyde dehydrogenase
sw_9_scaffold_342_24
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20504..21913
DNA (1410bp) protein (470aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH; ABC-type branched-chain amino acid transport system, permease I
sw_9_scaffold_342_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21921..23660
DNA (1740bp) protein (580aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N7Q7_9EURY
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERG92735.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_9_scaffold_342_26
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23657..24628
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW79_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein II {ECO:0000313|EMBL:EMA10429.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
sw_9_scaffold_342_27
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24885..26447
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZ03_9EURY
livJ3; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC40965.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteri
sw_9_scaffold_342_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26531..27241
DNA (711bp) protein (237aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N891_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG92733.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_9_scaffold_342_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27367..27756
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKR4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46261.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying items 1-30 of 34 in total

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