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sw_9_scaffold_248

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_248_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..345
DNA (345bp) protein (115aa)
TRK potassium uptake system protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVI6_HALVA
TRK potassium uptake system protein {ECO:0000313|EMBL:EMA00862.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
trkA3; TRK potassium uptake system protein
sw_9_scaffold_248_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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348..578
DNA (231bp) protein (77aa)
Transcription regulator n=5 Tax=Haloarcula RepID=Q5UXL9_HALMA
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:EMA17583.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_9_scaffold_248_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(601..1092)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003674CF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47714.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_9_scaffold_248_trna_1
unknown

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comp(1094..1178)
DNA (85bp)
transferRNA
sw_9_scaffold_248_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1442..1714
DNA (273bp) protein (91aa)
Putative signal-transducing histidine kinase / response regulator n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DPE2_9EURY
HTR-like protein {ECO:0000313|EMBL:KDE57021.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp.
sw_9_scaffold_248_5
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1818..2663
DNA (846bp) protein (282aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDK39737.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK39737.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DU82_9EURY
putative signal-transducing histidine kinase / response regulator
sw_9_scaffold_248_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2686..3201)
DNA (516bp) protein (172aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MB96_9EURY
Peptidylprolyl isomerase {ECO:0000313|EMBL:EMA41680.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
sw_9_scaffold_248_7
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3288..4319)
DNA (1032bp) protein (344aa)
FAD dependent oxidoreductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D450_HALXS
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEH37449.1}; Flags: Precursor;; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger x
sw_9_scaffold_248_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4536..4739
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47906.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_248_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4770..6980)
DNA (2211bp) protein (737aa)
tatC1; Sec-independent protein translocase component TatC1; K03118 sec-independent protein translocase protein TatC id=24647688 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Sec-independent protein secretion pathway component TatC {ECO:0000313|EMBL:ERH08822.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07H
protein export
sw_9_scaffold_248_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7083..8360)
DNA (1278bp) protein (426aa)
Cysteine desulfurase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KFB0_9EURY
Cysteine desulfurase {ECO:0000313|EMBL:EMA19533.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
nifS1; cysteine desulfurase
sw_9_scaffold_248_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8383..8679)
DNA (297bp) protein (99aa)
Uncharacterized protein n=7 Tax=Haloarcula RepID=G0HSY1_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56000.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_9_scaffold_248_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8696..9424)
DNA (729bp) protein (243aa)
TPR repeat-containing protein id=24647550 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
sw_9_scaffold_248_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9492..10709)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22762.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_248_14
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10848..11198)
DNA (351bp) protein (117aa)
50S ribosomal protein L12 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WZE6_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali D
50S ribosomal protein L12a (P1/P2)
sw_9_scaffold_248_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11201..12259)
DNA (1059bp) protein (353aa)
50S ribosomal protein L10 n=2 Tax=Haloarcula hispanica RepID=G0HVH3_HALHT
rplP0; acidic ribosomal protein P0/50S ribosomal protein L10E
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_9_scaffold_248_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12261..12899)
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGI4_9EURY
50S ribosomal protein L10Ae (L1p)
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;
Displaying 17 items

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