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sw_9_scaffold_419

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_419_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(109..234)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:CCC39939.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_9_scaffold_419_2
unknown

Not on your lists

comp(541..903)
DNA (363bp) protein (121aa)

This feature has no annotations

sw_9_scaffold_419_3
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1007..1708
DNA (702bp) protein (234aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4)
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:AEG14482.1}; EC=3.1.21.4 {ECO:0000313|EMBL:AEG14482.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae
Type II site-specific deoxyribonuclease n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPM0_DESK7
sw_9_scaffold_419_4
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1667..3898)
DNA (2232bp) protein (744aa)
type i restriction-modification system methyltransferase subunit id=24643713 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ERH13440.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archa
type i restriction-modification system methyltransferase subunit
sw_9_scaffold_419_5
unknown

Not on your lists

comp(4115..4285)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_9_scaffold_419_6
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4285..4506)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZB42_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83599.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
sw_9_scaffold_419_trna_1
unknown

Not on your lists

comp(4813..4884)
DNA (72bp)
transferRNA
sw_9_scaffold_419_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5120..5593)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLR1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45385.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_9_scaffold_419_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5684..6061
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKD1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23745.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_419_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6395..6724
DNA (330bp) protein (110aa)
DNA polymerase sliding clamp subunit n=1 Tax=Halomicrobium katesii RepID=UPI00037BEC1E
frt; ferritin
Ferritin {ECO:0000313|EMBL:AEM57134.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960 / D
sw_9_scaffold_419_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6743..6922)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ12764.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
sw_9_scaffold_419_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7016..7609
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LCZ5_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30309.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_9_scaffold_419_12

Not on your lists

7611..8393
DNA (783bp) protein (261aa)
Putative metal-dependent phosphoesterases (PHP family) n=1 Tax=uncultured archaeon A07HB70 RepID=V4XWC4_9ARCH
Putative metal-dependent phosphoesterases (PHP family) {ECO:0000313|EMBL:ESS06518.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
PHP domain protein
sw_9_scaffold_419_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8456..8620
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PI64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10126.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_419_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8682..9380)
DNA (699bp) protein (233aa)
Thioredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM1_9EURY
Thioredoxin {ECO:0000313|EMBL:EMA44199.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
thioredoxin
sw_9_scaffold_419_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9384..10139)
DNA (756bp) protein (252aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY51_HALVA
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA00714.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF-7; branched-chain amino acid ABC transporter ATP-binding protein
sw_9_scaffold_419_16

Not on your lists

comp(10136..10894)
DNA (759bp) protein (253aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J8_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS05592.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_9_scaffold_419_17

Not on your lists

comp(10891..12036)
DNA (1146bp) protein (382aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XTS0_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS05593.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livM-6; branched-chain amino acid ABC transporter permease
sw_9_scaffold_419_18

Not on your lists

comp(12033..12986)
DNA (954bp) protein (318aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCD5_9ARCH
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ESS05594.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
livH1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
sw_9_scaffold_419_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13087..14478)
DNA (1392bp) protein (464aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IXC9_HALVA
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:EMA00718.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
livK-2; branched-chain amino acid ABC transporter amino acid-binding protein
sw_9_scaffold_419_20
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14869..15267
DNA (399bp) protein (133aa)
Universal stress protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CHQ3_9EURY
Universal stress protein {ECO:0000313|EMBL:ELZ21409.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13
usp33; universal stress protein
sw_9_scaffold_419_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15725..17701)
DNA (1977bp) protein (659aa)
Acyl-CoA synthetase {ECO:0000313|EMBL:CAI50657.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAI50657.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
acs_4; acyl-CoA synthetase I 4 (EC:6.2.1.-)
Acyl-CoA synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMK1_NATPD
sw_9_scaffold_419_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17807..19657)
DNA (1851bp) protein (617aa)
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW50_HALBP
DNA binding protein
DNA binding protein {ECO:0000313|EMBL:ELY31755.1}; Predicted DNA binding protein {ECO:0000313|EMBL:ADQ69270.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
sw_9_scaffold_419_23
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19704..21656)
DNA (1953bp) protein (651aa)
Acetate/CoA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5E0_HALJB
acetate/CoA ligase
Acetate/CoA ligase {ECO:0000313|EMBL:ADJ15636.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
sw_9_scaffold_419_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21740..23509
DNA (1770bp) protein (590aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrob
Pyruvate kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYS9_HALMD
sw_9_scaffold_419_25
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23509..25107
DNA (1599bp) protein (533aa)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A4P9_9EURY
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ELY93316.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensi
glycerol-3-phosphate dehydrogenase
sw_9_scaffold_419_26
unknown

Not on your lists

25104..25247
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 27 items

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