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sw_9_scaffold_502

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_502_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..861
DNA (861bp) protein (287aa)
ABC transporter n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DIY1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ34773.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
ABC transporter
sw_9_scaffold_502_2
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(863..1705)
DNA (843bp) protein (281aa)
SAM-dependent methyltransferase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DKT0_9EURY
SAM-dependent methyltransferase {ECO:0000313|EMBL:ELZ34774.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichen
methyltransferase, FkbM family
sw_9_scaffold_502_3
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1713..2861)
DNA (1149bp) protein (383aa)
Peptidase M50 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F596_9EURY
Peptidase M50 {ECO:0000313|EMBL:ELZ55095.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
peptidase M50 rbh
sw_9_scaffold_502_4
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3045..3299)
DNA (255bp) protein (85aa)
Uncharacterized protein n=6 Tax=Halorubrum RepID=M0DBY0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32308.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_9_scaffold_502_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3605..4453)
DNA (849bp) protein (283aa)
Bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F706_9EURY
Bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE {ECO:0000313|EMBL:ELZ55093.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE rbh
sw_9_scaffold_502_6
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4586..5305
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
Uridylate kinase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DIY3_9EURY
pyrH; uridylate kinase rbh
sw_9_scaffold_502_7
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5302..7032
DNA (1731bp) protein (577aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177, ECO:0000313|EMBL:ELZ34779.1};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=122748
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DKT6_9EURY
sw_9_scaffold_502_8
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7033..7257
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DH27_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34780.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_9_scaffold_502_9
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7383..8273
DNA (891bp) protein (297aa)
Histidine kinase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F918_9EURY
Histidine kinase {ECO:0000313|EMBL:ELZ55089.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
histidine kinase rbh
sw_9_scaffold_502_10
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8257..8391)
DNA (135bp) protein (45aa)
Uncharacterized protein n=9 Tax=Halorubrum RepID=M0DC26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA59526.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
sw_9_scaffold_502_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8506..8799)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F795_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55087.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_9_scaffold_502_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8897..10642)
DNA (1746bp) protein (582aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57) rbh
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F502_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
sw_9_scaffold_502_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10653..10958)
DNA (306bp) protein (102aa)
30S ribosomal protein S24e n=2 Tax=Halorubrum RepID=M0DH32_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" s
rps24e; 30S ribosomal protein S24e
sw_9_scaffold_502_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11108..11692
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F913_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55084.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
sw_9_scaffold_502_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11761..12405)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ88_9EURY
UPF0218 protein C472_12947 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichens
hypothetical protein
sw_9_scaffold_502_16
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12434..12631)
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F791_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hoc
DNA-directed RNA polymerase subunit E, RpoE2
sw_9_scaffold_502_17
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12631..13206)
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EMA59533.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA59533.1};; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit E n=5 Tax=Halorubrum RepID=M0D9X2_9EURY
DNA-directed RNA polymerase subunit E'
sw_9_scaffold_502_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13228..13698)
DNA (471bp) protein (157aa)
Vapc superfamily-like protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F588_9EURY
Vapc superfamily-like protein {ECO:0000313|EMBL:ELZ34790.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
PilT N-term./Vapc superfamily-like protein
sw_9_scaffold_502_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13700..14941)
DNA (1242bp) protein (414aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F909_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227481 species="Arc
translation initiation factor IF-2 subunit gamma
sw_9_scaffold_502_20

Not on your lists


15052..15174
DNA (123bp) protein (41aa)
DITPase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y419_9ARCH
DITPase {ECO:0000313|EMBL:ESS05717.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Displaying 20 items

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