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sw_9_scaffold_1509

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_1509_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..117
DNA (117bp) protein (39aa)
nirA_2; ferredoxin--nitrite reductase 2 (EC:1.7.7.1)
Probable sulfite/nitrite reductase (Ferredoxin) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT70_NATPD
Probable sulfite/nitrite reductase (Ferredoxin) {ECO:0000313|EMBL:CAI48664.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_9_scaffold_1509_2

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422..1675
DNA (1254bp) protein (418aa)
Transposase, IS605 OrfB family, central region n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y5E3_9ARCH
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS07931.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
transposase, IS605 OrfB family
sw_9_scaffold_1509_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1754..2788)
DNA (1035bp) protein (345aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X5P3_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY57119.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyl
NAD-dependent epimerase/dehydratase
sw_9_scaffold_1509_trna_1
unknown

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comp(3272..3345)
DNA (74bp)
transferRNA
sw_9_scaffold_1509_4
unknown

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comp(3415..4122)
DNA (708bp) protein (236aa)

This feature has no annotations

sw_9_scaffold_1509_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4341..5972)
DNA (1632bp) protein (544aa)
Glycosyl hydrolase, glucoamylase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HKB2_9EURY
Glycosyl hydrolase, glucoamylase {ECO:0000313|EMBL:ESP90223.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidat
glycosyl hydrolase, glucoamylase
sw_9_scaffold_1509_6
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5985..6116)
DNA (132bp) protein (44aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYJ2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA42396.1}; Flags: Fragment;; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
glycoside hydrolase 15-like protein
sw_9_scaffold_1509_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6160..7509)
DNA (1350bp) protein (450aa)
Sulfatase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WCE0_9EURY
Sulfatase {ECO:0000313|EMBL:ELY45983.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
sulfatase
sw_9_scaffold_1509_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7831..8469
DNA (639bp) protein (213aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=24655817 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rpl1P; 50S ribosomal protein L1P
sw_9_scaffold_1509_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8471..9529
DNA (1059bp) protein (353aa)
50S ribosomal protein L10 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL10_NATPD
rplP0; acidic ribosomal protein P0
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000255|HAMAP-Rule:MF_00280}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
sw_9_scaffold_1509_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9538..9879
DNA (342bp) protein (114aa)
50S ribosomal protein L12 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQI5_HALUD
rpl12p; 50S ribosomal protein L12P
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_9_scaffold_1509_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10234..11199
DNA (966bp) protein (322aa)
hypothetical protein; K08971 putative membrane protein id=24649309 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative membrane protein {ECO:0000313|EMBL:ERH10403.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
integral membrane protein superfamily
sw_9_scaffold_1509_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11388..11735
DNA (348bp) protein (116aa)
Transcriptional regulator n=4 Tax=Haloarcula RepID=G0HRI0_HALHT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHB67054.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601
sw_9_scaffold_1509_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11969..12265
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT85_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58319.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_9_scaffold_1509_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12326..13456
DNA (1131bp) protein (377aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=24644240 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ATP-dependent DNA helicase, Rep family {ECO:0000313|EMBL:ERH08473.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
UvrD/REP helicase
sw_9_scaffold_1509_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13486..14097
DNA (612bp) protein (204aa)
Superfamily I DNA and RNA helicase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZV1_9EURY
Superfamily I DNA and RNA helicase {ECO:0000313|EMBL:ERG89588.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
uvrD; repair helicase
sw_9_scaffold_1509_16
unknown

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14222..15376
DNA (1155bp) protein (385aa)

This feature has no annotations

sw_9_scaffold_1509_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15420..16463)
DNA (1044bp) protein (348aa)
nonsense mediated mRNA decay-like protein id=24644472 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
NMD protein affecting ribosome stability and mRNA decay {ECO:0000313|EMBL:ERH08694.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX
nonsense mediated mRNA decay-like protein
Displaying 18 items

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