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sw_9_scaffold_968

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_968_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

153..950
DNA (798bp) protein (266aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEK7_9EURY
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EMA56422.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
cobalamin (vitamin B12) biosynthesis CbiX protein
sw_9_scaffold_968_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(971..1150)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11069.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_968_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1137..1790)
DNA (654bp) protein (218aa)
hypothetical protein id=24655504 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88962.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_9_scaffold_968_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2001..2837)
DNA (837bp) protein (279aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1324957 species="Archaea; Eury
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=24614168 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
arginyl-tRNA synthetase (EC:6.1.1.19)
sw_9_scaffold_968_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2892..3560)
DNA (669bp) protein (223aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:ELZ37455.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1
Arginine--tRNA ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DPR0_9EURY
Suspect SCG annotation. See neighboring gene [sw_9_scaffold_968_4].
arginyl-tRNA synthetase
sw_9_scaffold_968_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3829..5328
DNA (1500bp) protein (500aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NWW1_9EURY
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ERH08605.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
oxidoreductase molybdopterin binding
sw_9_scaffold_968_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5402..5692
DNA (291bp) protein (97aa)
hypothetical protein id=24647467 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08607.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_968_8
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5718..6011)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0I6V4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR53468.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_9_scaffold_968_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6011..6283)
DNA (273bp) protein (91aa)
transcriptional regulator id=24647176 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ERH08321.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcriptional regulator
sw_9_scaffold_968_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6352..8292)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1085028 species="Archaea; Eur
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PL04_9EURY
sw_9_scaffold_968_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8495..9064)
DNA (570bp) protein (190aa)
HoxA-like transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG67_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ELZ22246.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
DNA-binding protein
sw_9_scaffold_968_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9419..9895
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ23_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36218.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_9_scaffold_968_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10041..10283
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K553_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39243.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_9_scaffold_968_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10372..10992
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PEI3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08474.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_968_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11032..11235)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R035_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89929.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_9_scaffold_968_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11330..11761)
DNA (432bp) protein (144aa)
FO synthase subunit 2 n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHH8_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:ERH09554.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
radical SAM domain-containing protein
sw_9_scaffold_968_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11758..12429)
DNA (672bp) protein (224aa)
FO synthase subunit 2 {ECO:0000313|EMBL:ERH09554.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cofG, cofH; FO synthase subunit 2 id=24645337 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
cofG, cofH; FO synthase subunit 2
sw_9_scaffold_968_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12411..12647)
DNA (237bp) protein (79aa)
cofG, cofH; FO synthase subunit 2 id=24648423 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
FO synthase subunit 2 {ECO:0000313|EMBL:ERH09554.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
FO synthase subunit 2
sw_9_scaffold_968_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12893..13699
DNA (807bp) protein (269aa)
Sodium-calcium exchanger membrane region protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFH5_9EURY
sodium/calcium exchanger family protein
Sodium-calcium exchanger membrane region protein {ECO:0000313|EMBL:ERJ06471.1}; Sodium/calcium exchanger family protein {ECO:0000313|EMBL:CCQ34364.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Ha
sw_9_scaffold_968_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13717..14187
DNA (471bp) protein (157aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P123_HALMD
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ACV49038.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicr
sw_9_scaffold_968_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14208..15236
DNA (1029bp) protein (343aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halomicrobium katesii RepID=UPI00036DD981
phosphoribosylaminoimidazole-succinocarboxamide synthase
SAICAR synthetase {ECO:0000313|EMBL:ACV47541.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strai
sw_9_scaffold_968_22
unknown

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comp(15249..15425)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_9_scaffold_968_23

Not on your lists

15570..15773
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:ESS08537.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
sw_9_scaffold_968_24
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15908..16495
DNA (588bp) protein (196aa)
lig; DNA ligase (ATP) (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=523841 species="Archaea; Eu
DNA ligase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R521_HALMT
sw_9_scaffold_968_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16492..17487
DNA (996bp) protein (332aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQ69_9EURY
ligB; DNA ligase (ATP)
sw_9_scaffold_968_26

Not on your lists

17595..18050
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS10988.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_9_scaffold_968_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18047..18484)
DNA (438bp) protein (146aa)
Acyl-CoA thioester hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM09_9EURY
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ELZ24286.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
acyl-CoA thioester hydrolase
sw_9_scaffold_968_28
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18608..20200
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JPT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09700.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
Displaying 28 items

View Taxonomy