ggKbase home page

sw_9_scaffold_5472

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_5472_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

288..875
DNA (588bp) protein (196aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076};; TaxID=1033806 species="Archaea
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFY9_9EURY
sw_9_scaffold_5472_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(872..1093)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTG6_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59009.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_9_scaffold_5472_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1439..2254)
DNA (816bp) protein (272aa)
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNG3_9EURY
sw_9_scaffold_5472_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2256..3146)
DNA (891bp) protein (297aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1324957 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=24616750 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
histidyl-tRNA synthetase (EC:6.1.1.21)
sw_9_scaffold_5472_5
unknown

Not on your lists

comp(3560..3742)
DNA (183bp) protein (61aa)

This feature has no annotations

sw_9_scaffold_5472_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3803..4561)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93000.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_9_scaffold_5472_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4594..5343)
DNA (750bp) protein (250aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000313|EMBL:ELZ45605.1};; Phos
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ECX8_9EURY
sw_9_scaffold_5472_8
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6330..6500)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CKE6_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY76339.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
Displaying 8 items

View Taxonomy