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qs_7_scaffold_135

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_7_scaffold_135_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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406..2391
DNA (1986bp) protein (662aa)
Acetate/CoA ligase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LNG0_HALLT
Acetate/CoA ligase {ECO:0000313|EMBL:ACM56898.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC
acetate/CoA ligase
qs_7_scaffold_135_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2641..4011
DNA (1371bp) protein (457aa)
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU95_9EURY
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA49312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
livK1; branched-chain amino acid ABC transporter amino acid-binding protein
qs_7_scaffold_135_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4205..5176
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIC5_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA44195.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH; ABC-type branched-chain amino acid transport system, permease I
qs_7_scaffold_135_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5316..6467
DNA (1152bp) protein (384aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA44196.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livM1; putative branched-chain amino acids ABC transporter permease
qs_7_scaffold_135_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6467..7225
DNA (759bp) protein (253aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEL0_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein I {ECO:0000313|EMBL:EMA44197.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qs_7_scaffold_135_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7222..7965
DNA (744bp) protein (248aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP4_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44198.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
qs_7_scaffold_135_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7969..8700
DNA (732bp) protein (244aa)
Thioredoxin n=2 Tax=Haloarcula RepID=M0JUV1_9EURY
Thioredoxin {ECO:0000313|EMBL:EMA17726.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;"
trxA4; thioredoxin
qs_7_scaffold_135_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9086..9490)
DNA (405bp) protein (135aa)
Universal stress protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID1_9EURY
Universal stress protein {ECO:0000313|EMBL:EMA44200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
usp; stress response protein-like protein
qs_7_scaffold_135_9
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9911..11524
DNA (1614bp) protein (538aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WWW7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY53686.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
qs_7_scaffold_135_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11624..12658)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QSA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92876.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_7_scaffold_135_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12845..13111)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49304.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_7_scaffold_135_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13465..15339)
DNA (1875bp) protein (625aa)
coxA1; cox-type terminal oxidase subunit I (EC:1.9.3.1)
Cytochrome C oxidase subunit I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP8_9EURY
Cytochrome C oxidase subunit I {ECO:0000313|EMBL:EMA44203.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
qs_7_scaffold_135_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15516..15950)
DNA (435bp) protein (145aa)
Cox cluster protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LY88_9EURY
Cox cluster protein {ECO:0000313|EMBL:EMA38138.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
cox cluster protein
qs_7_scaffold_135_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16074..16472)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44205.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_7_scaffold_135_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16589..18715)
DNA (2127bp) protein (709aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBH5_9EURY
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:EMA54918.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
DEAD/DEAH box helicase domain protein
qs_7_scaffold_135_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19175..19372
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55160.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_7_scaffold_135_17
unknown

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comp(19418..19633)
DNA (216bp) protein (72aa)

This feature has no annotations

qs_7_scaffold_135_18
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19630..19935)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BKM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ11441.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
qs_7_scaffold_135_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20070..20651)
DNA (582bp) protein (194aa)
DNA primase large subunit (EC:2.7.7.-)
DNA primase large subunit PriL n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N326_9EURY
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thail
qs_7_scaffold_135_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21279..21959
DNA (681bp) protein (227aa)
O-methyltransferase family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSZ4_9EURY
O-methyltransferase family protein {ECO:0000313|EMBL:EMA35499.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
putative O-methyltransferase
qs_7_scaffold_135_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22062..22778
DNA (717bp) protein (239aa)
GCN5-related N-acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D877_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EDY17431.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GCN5 family acetyltransferase
qs_7_scaffold_135_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23003..23566)
DNA (564bp) protein (188aa)
Acetyltransferase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXU1_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA38407.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hat2; acetyltransferase
qs_7_scaffold_135_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23900..24643)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4P5_9EURY
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1132509 species="Arch
proliferating cell nuclear antigen
qs_7_scaffold_135_24
unknown

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24821..25045
DNA (225bp) protein (75aa)

This feature has no annotations

qs_7_scaffold_135_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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25205..25777
DNA (573bp) protein (191aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWL6_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA36759.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
qs_7_scaffold_135_trna_1
unknown

Not on your lists

comp(25886..25958)
DNA (73bp)
transferRNA
qs_7_scaffold_135_26
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26112..27599
DNA (1488bp) protein (496aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA CCA-pyrophosphorylase (EC:2.7.7.72)
tRNA CCA-pyrophosphorylase n=1 Tax=Halorubrum sp. T3 RepID=UPI00036061F9
qs_7_scaffold_135_27
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27578..28327)
DNA (750bp) protein (250aa)
Deacetylases, including yeast histone deacetylase and acetoin utilization protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YDV9_9EURY
Deacetylases, including yeast histone deacetylase and acetoin utilization protein {ECO:0000313|EMBL:GAD51881.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
hdal; HdaI-type histone deacetylase
qs_7_scaffold_135_28
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28613..29005)
DNA (393bp) protein (131aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:EMA60714.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
histones H3 and H4
qs_7_scaffold_135_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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29380..30891
DNA (1512bp) protein (504aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) id=24616130 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:ESP87957.1}; EC=6.1.1.20 {ECO:0000313|EMBL:ESP87957.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
phenylalanyl-tRNA synthetase, alpha subunit
Displaying items 1-30 of 36 in total

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