ggKbase home page

CG08_land_8_20_14_0.20_scaffold_8051_c

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG08_land_8_20_14_0.20_scaffold_8051_c_1

Not on your lists

comp(182..478)
DNA (297bp) protein (99aa)
LSU ribosomal protein L12AE bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; species="Archaea.;" source="archaeon GW2011_AR15.;"
rpl12p; 50S ribosomal protein L12
CG08_land_8_20_14_0.20_scaffold_8051_c_2

Not on your lists


comp(517..1359)
DNA (843bp) protein (281aa)
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; species="Archaea.;" source="archaeon GW2011_AR21.;"
rplP0; large subunit ribosomal protein L10
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 bin=GW2011_AR10_complete species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
CG08_land_8_20_14_0.20_scaffold_8051_c_3

Not on your lists


comp(1360..2019)
DNA (660bp) protein (220aa)
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO55389.1}; species="Archaea.;" source="archaeon GW2011_AR21.;"
rpl1P; large subunit ribosomal protein L1
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
CG08_land_8_20_14_0.20_scaffold_8051_c_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2237..2467
DNA (231bp) protein (77aa)
hypothetical protein
id=5240865 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
CG08_land_8_20_14_0.20_scaffold_8051_c_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2519..2887
DNA (369bp) protein (123aa)
PilT protein
PilT protein domain protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
CG08_land_8_20_14_0.20_scaffold_8051_c_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(2906..3385)
DNA (480bp) protein (160aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
CG08_land_8_20_14_0.20_scaffold_8051_c_7

Not on your lists


comp(3432..3872)
DNA (441bp) protein (147aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea.;" source="archaeon GW2011_AR10.;"
CG08_land_8_20_14_0.20_scaffold_8051_c_8

Not on your lists

comp(3874..4059)
DNA (186bp) protein (62aa)
secE; protein transport protein Ssubunit gamma-related protein
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins bin=GW2011_AR10_complete species=Thermococcus sibiricus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; species="Archaea.;" source="archaeon GW2011_AR10.;"
CG08_land_8_20_14_0.20_scaffold_8051_c_9

Not on your lists

comp(4328..5461)
DNA (1134bp) protein (378aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; species="Archaea.;" source="archaeon GW2011_AR10.;"
CG08_land_8_20_14_0.20_scaffold_8051_c_10

Not on your lists

5572..6519
DNA (948bp) protein (316aa)
ribose-1/5-bisphosphate isomerase bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Ribose-1/5-bisphosphate isomerase {ECO:0000313|EMBL:EKD64090.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation initiation factor IF-2
CG08_land_8_20_14_0.20_scaffold_8051_c_11
unknown

Not on your lists

comp(6558..7406)
DNA (849bp) protein (283aa)

This feature has no annotations

CG08_land_8_20_14_0.20_scaffold_8051_c_12
unknown

Not on your lists

comp(7556..7978)
DNA (423bp) protein (141aa)

This feature has no annotations

Displaying 12 items

View Taxonomy