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RifSed_csp1_13ft_3_scaffold_2398

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_3_scaffold_2398_1
unknown

Not on your lists

2..154
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_2398_trna_1
unknown

Not on your lists

comp(171..266)
-----------------
DNA (96bp)
transferRNA Arg
RifSed_csp1_13ft_3_scaffold_2398_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(324..1259)
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000374592B
peptidylprolyl isomerase FKBP-type
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_2398_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1284..2207)
-----------------
DNA (924bp)
protein (308aa)
Transcription initiation factor IIB Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YTY3_9EURY
Transcription initiation factor IIB (TFIIB)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_2398_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2354..3088)
-----------------
DNA (735bp)
protein (245aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_2398_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3099..3587)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein; K09129 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_2398_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3640..4566)
-----------------
DNA (927bp)
protein (309aa)
Glycosyl transferase group 1 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
group 1 glycosyl transferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_2398_7
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(4711..5844)
-----------------
DNA (1134bp)
protein (378aa)
Glycosyltransferase Tax=mine drainage metagenome RepID=T0Z144_9ZZZZ
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
RifSed_csp1_13ft_3_scaffold_2398_8
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5848..6948)
-----------------
DNA (1101bp)
protein (367aa)
Putative glycosyltransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N203_ANATU
Glycosyl transferase, group 1
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_3_scaffold_2398_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(6953..8038)
-----------------
DNA (1086bp)
protein (362aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000360B956
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_13ft_3_scaffold_2398_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

8135..8920
-----------------
DNA (786bp)
protein (262aa)
Glycosyl transferase Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKT8_ACIS0
glycosyl transferase
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 11 items

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