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RifSed_csp1_13ft_3_scaffold_1875

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_13ft_3_scaffold_1875_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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200..622
-----------------
DNA (423bp)
protein (141aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=mine drainage metagenome RepID=T1C8Q6_9ZZZZ
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_2
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(679..1221)
-----------------
DNA (543bp)
protein (181aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
Putative 3-methyladenine DNA glycosylase Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6G4_9ARCH
RifSed_csp1_13ft_3_scaffold_1875_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1495..2031
-----------------
DNA (537bp)
protein (179aa)
Excalibur domain-containing protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BAK3_9ARCH
excalibur domain-containing protein
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_3_scaffold_1875_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2231..2563
-----------------
DNA (333bp)
protein (111aa)
Putative uncharacterized protein Tax=Streptomyces griseoaurantiacus M045 RepID=F3NKA6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAD84533.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
RifSed_csp1_13ft_3_scaffold_1875_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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2775..3119
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Euryarchaeota_67_27_curated
RifSed_csp1_13ft_3_scaffold_1875_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3112..3288
-----------------
DNA (177bp)
protein (59aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_3_scaffold_1875_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3543..4919
-----------------
DNA (1377bp)
protein (459aa)
FAD linked oxidase domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A5Y9_THECD
FAD linked oxidase domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5255..6085
-----------------
DNA (831bp)
protein (277aa)
Iron/zinc/nickel/cobalt/cadmium efflux protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKY8_GEOSK
fieF; iron/zinc/nickel/cobalt/cadmium efflux protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(6426..6785)
-----------------
DNA (360bp)
protein (120aa)
Putative Amicyanin Tax=Pandoraea sp. SD6-2 RepID=R7WW18_9BURK
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(6799..7038)
-----------------
DNA (240bp)
protein (80aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
RifSed_csp1_13ft_3_scaffold_1875_11
unknown

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comp(7035..7151)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

RifSed_csp1_13ft_3_scaffold_1875_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(7161..7925)
-----------------
DNA (765bp)
protein (255aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_13
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

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comp(8248..8571)
-----------------
DNA (324bp)
protein (108aa)
DsrE family protein Tax=Halobacteriaceae RepID=L9Y0B8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKR73760.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
DsrE family protein
RifSed_csp1_13ft_3_scaffold_1875_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8568..8912)
-----------------
DNA (345bp)
protein (115aa)
regulatory protein ArsR bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcriptional regulator
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_13ft_3_scaffold_1875_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(8977..9513)
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037E29FB
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
Displaying 15 items

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