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RifSed_csp1_16ft_2_scaffold_16594

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_16594_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1..1218)
DNA (1218bp) protein (406aa)
UPI0003D1ADD7 related cluster Tax=unknown RepID=UPI0003D1ADD7
amidophosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_16594_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1417..1632)
DNA (216bp) protein (72aa)
Putative snRNP Sm-like protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KY05_METHD
Putative snRNP Sm-like protein {ECO:0000256|HAMAP-Rule:MF_00257}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small nuclear ribonucleoprotein
RifSed_csp1_16ft_2_scaffold_16594_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1718..2200
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8R8_UNCMA
PUA-domain protein {ECO:0000313|EMBL:KCZ70575.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA-guanine(15) transglycosylase
RifSed_csp1_16ft_2_scaffold_16594_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2242..2610
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZC8_METBU
Uncharacterized protein {ECO:0000313|EMBL:KCZ70576.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_16594_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2607..3182
DNA (576bp) protein (192aa)
ZPR1-like zinc finger protein Tax=Methanolobus psychrophilus R15 RepID=K4MFW5_9EURY
ZPR1-related zinc finger protein {ECO:0000313|EMBL:KCZ70577.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ZPR1-like zinc finger protein
RifSed_csp1_16ft_2_scaffold_16594_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3193..3882
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK04_METAC
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:KCZ72902.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_16594_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3889..5292
DNA (1404bp) protein (468aa)
Amine oxidase Tax=Methanolobus psychrophilus R15 RepID=K4MFY9_9EURY
Flavin containing amine oxidoreductase {ECO:0000313|EMBL:KCZ72903.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
amine oxidase
RifSed_csp1_16ft_2_scaffold_16594_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5300..5647)
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73593.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_2_scaffold_16594_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5750..5971
DNA (222bp) protein (74aa)
Xylose isomerase domain protein TIM barrel Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7Y2_METMS
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:KCZ73592.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
xylose isomerase
Displaying 9 items

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