ggKbase home page

RifSed_csp1_16ft_2_scaffold_32522

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_2_scaffold_32522_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)
Uncharacterized protein conserved in archaea Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9D3_METCZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_32522_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

241..1452
DNA (1212bp) protein (404aa)
pan-1; proteasome-activating nucleotidase (EC:3.6.1.3)
26S proteasome regulatory subunit (Proteasome-activating nucleotidase) Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W546_UNCMA
26S proteasome subunit P45 family {ECO:0000313|EMBL:KCZ72996.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_2_scaffold_32522_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1469..1687)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72995.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_2_scaffold_32522_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1756..2076
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNG7_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ72994.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_32522_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(2073..2783)
DNA (711bp) protein (237aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_2_scaffold_32522_trna_1
unknown

Not on your lists

comp(2860..2932)
DNA (73bp)
transferRNA His
RifSed_csp1_16ft_2_scaffold_32522_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3031..3465)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W9_METTP
Putative exosome subunit {ECO:0000313|EMBL:KCZ72328.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_2_scaffold_32522_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3465..4052)
DNA (588bp) protein (196aa)
50S ribosomal protein L15e Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL15E_METBU
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein L15e
Displaying 8 items

View Taxonomy