ggKbase home page

RifSed_csp2_16ft_3_scaffold_19764

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_19764_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(83..634)
DNA (552bp) protein (184aa)
Response regulator receiver protein Tax=Methanolobus psychrophilus R15 RepID=K4MBN1_9EURY
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ72124.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
response regulator receiver protein
RifSed_csp2_16ft_3_scaffold_19764_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(747..1616)
DNA (870bp) protein (290aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=uncultured Chloroflexi bacterium RepID=H5SN24_9CHLR
RifSed_csp2_16ft_3_scaffold_19764_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1600..2697)
DNA (1098bp) protein (366aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXK3_ANATU
RifSed_csp2_16ft_3_scaffold_19764_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2796..3704
DNA (909bp) protein (303aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X36_METBU
RifSed_csp2_16ft_3_scaffold_19764_trna_1
unknown

Not on your lists

3788..3872
DNA (85bp)
transferRNA Leu
RifSed_csp2_16ft_3_scaffold_19764_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3942..4331
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZZ6_METMA
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_19764_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4328..5524)
DNA (1197bp) protein (399aa)
S-adenosylmethionine synthase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWF0_METHD
archaeal S-adenosylmethionine synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_19764_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5865..6557
DNA (693bp) protein (231aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tRNA-modifying enzyme Tax=Methanolobus psychrophilus R15 RepID=K4MCK2_9EURY
tRNA-modifying enzyme
RifSed_csp2_16ft_3_scaffold_19764_8
unknown

Not on your lists

comp(6627..7280)
DNA (654bp) protein (218aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_19764_9
unknown

Not on your lists

comp(7447..8085)
DNA (639bp) protein (213aa)

This feature has no annotations

Displaying 10 items

View Taxonomy