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RifSed_csp2_16ft_3_scaffold_2878

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_2878_1
unknown

Not on your lists

comp(62..829)
DNA (768bp) protein (256aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_2878_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1185..3032
DNA (1848bp) protein (616aa)
UPI0003D1C356 related cluster Tax=unknown RepID=UPI0003D1C356
metal-dependent phosphohydrolase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_2878_3
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3192..4061
DNA (870bp) protein (290aa)
Peptidase Tax=planctomycete KSU-1 RepID=I3IPE4_9PLAN
Peptidase {ECO:0000313|EMBL:GAB63589.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
RifSed_csp2_16ft_3_scaffold_2878_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4207..5160
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DI04_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62147.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_5
unknown

Not on your lists

5194..5463
DNA (270bp) protein (90aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_2878_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6256..8199
DNA (1944bp) protein (648aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyl-coenzyme A synthetase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHB9_9FIRM
Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
RifSed_csp2_16ft_3_scaffold_2878_7
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(8223..8714)
DNA (492bp) protein (164aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5M1_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17638.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
RifSed_csp2_16ft_3_scaffold_2878_8
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8680..12705)
DNA (4026bp) protein (1342aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5M1_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17638.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
RifSed_csp2_16ft_3_scaffold_2878_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12804..13142)
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Methanoregula boonei (strain 6A8) RepID=A7I9Y9_METB6
Uncharacterized protein {ECO:0000313|EMBL:KCZ70990.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_10
unknown

Not on your lists

13158..13295
DNA (138bp) protein (46aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_2878_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13427..13681
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73649.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_12
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

13699..14091
DNA (393bp) protein (131aa)
Alkylhydroperoxidase Tax=Natronorubrum bangense JCM 10635 RepID=L9WET3_9EURY
alkylhydroperoxidase
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
RifSed_csp2_16ft_3_scaffold_2878_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14113..14517
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EK17_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KCZ71044.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14530..15720
DNA (1191bp) protein (397aa)
Putative uncharacterized protein Tax=uncultured candidate division OP1 bacterium RepID=H5SRW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KCZ70340.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15946..16524)
DNA (579bp) protein (193aa)
Transposase Tax=Methanolobus psychrophilus R15 RepID=K4MB00_9EURY
transposase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_2878_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16620..16877)
DNA (258bp) protein (86aa)
Putative uncharacterized protein C5_0052 Tax=uncultured archaeon RepID=Q2Y4V4_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:KCZ72452.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_2878_17
unknown

Not on your lists

17345..17509
DNA (165bp) protein (55aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_2878_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17749..19620
DNA (1872bp) protein (624aa)
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KCZ73597.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase-like protein
Conserved repeat domain protein bin=GWF2_Lentisphaerae_49_21 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
RifSed_csp2_16ft_3_scaffold_2878_19
unknown

Not on your lists

19744..20004
DNA (261bp) protein (87aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_2878_20
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20033..21388
DNA (1356bp) protein (452aa)
Cytochrome c Tax=Geobacter metallireducens RepID=Q39X52_GEOMG
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AJE02864.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
RifSed_csp2_16ft_3_scaffold_2878_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21404..22096
DNA (693bp) protein (231aa)
Serine protease, subtilase family Tax=Geobacter sulfurreducens RepID=D7AL55_GEOSK
Subtilisin-like serine protease {ECO:0000313|EMBL:KCZ73596.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
subtilase family serine protease
Displaying 21 items

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