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RifSed_csp2_16ft_3_scaffold_7447

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_7447_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_7447_2
unknown

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comp(270..407)
DNA (138bp) protein (46aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_7447_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(774..1076)
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase, subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9S0_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7447_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1054..1470)
DNA (417bp) protein (139aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KCZ70762.1}; EC=3.6.1.- {ECO:0000313|EMBL:KCZ70762.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
NUDIX hydrolase Tax=Methanolobus psychrophilus R15 RepID=K4MGZ0_9EURY
NUDIX hydrolase
RifSed_csp2_16ft_3_scaffold_7447_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1470..2561)
DNA (1092bp) protein (364aa)
Small GTP-binding protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E842_METMS
Small GTP-binding protein domain {ECO:0000313|EMBL:KCZ70761.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
small GTP-binding protein
RifSed_csp2_16ft_3_scaffold_7447_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2624..3898
DNA (1275bp) protein (425aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KCZ70760.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KCZ70760.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase Tax=uncultured archaeon GZfos12E1 RepID=Q5Y0M7_9ARCH
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
RifSed_csp2_16ft_3_scaffold_7447_7

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comp(3929..4324)
DNA (396bp) protein (132aa)
Putative uncharacterized protein Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28114_ARCFU
Marine sediment metagenome DNA, contig: S03H2_L00550 {ECO:0000313|EMBL:GAH38910.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Nucleotidyltransferase domain protein
RifSed_csp2_16ft_3_scaffold_7447_8

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comp(4303..4731)
DNA (429bp) protein (143aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos33H6 RepID=Q64A00_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83777.1}; species="Archaea; environmental samples.;" source="uncultured archaeon GZfos33H6.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_7447_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4816..8106)
DNA (3291bp) protein (1097aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BGC6_THEXL
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_7447_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8437..9291
DNA (855bp) protein (285aa)
Periplasmic serine protease Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YEU0_DICT6
ClpP class periplasmic serine protease {ECO:0000313|EMBL:KCZ73040.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
periplasmic serine protease
RifSed_csp2_16ft_3_scaffold_7447_11
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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9387..11411
DNA (2025bp) protein (675aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
hypothetical protein Tax=Thiomicrospira arctica RepID=UPI000380F019
Tax=RBG_13_WOR_2_41_10_curated
RifSed_csp2_16ft_3_scaffold_7447_12
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(12172..12504)
DNA (333bp) protein (111aa)
DNA polymerase, beta-like region bin=GWC2_Syntrophobacterales_56_13 species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
putative nucleotidyltransferase
Tax=CG_Elusi_05
RifSed_csp2_16ft_3_scaffold_7447_13
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(12506..12724)
DNA (219bp) protein (73aa)
hepn domain-containing protein
Hepn domain, putative bin=GWC2_Planctomycetes_45_44 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=CG_Elusi_05
RifSed_csp2_16ft_3_scaffold_7447_14

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comp(12964..13275)
DNA (312bp) protein (104aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JB23_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKL55470.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
addiction module antitoxin
RifSed_csp2_16ft_3_scaffold_7447_15
CG_Nitrosp_01, Nitrospirae, Bacteria

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comp(13260..13448)
DNA (189bp) protein (63aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JB22_9ARCH
hypothetical protein
Tax=CG_Nitrosp_01
Displaying 15 items

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