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RifSed_csp2_16ft_3_scaffold_6152

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_6152_1
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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259..1161
DNA (903bp) protein (301aa)
Transmembrane exosortase (Exosortase_EpsH) Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYD6_METHD
Transmembrane exosortase (Exosortase_EpsH)
Transmembrane exosortase (Exosortase_EpsH) {ECO:0000313|EMBL:AGB49700.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_6152_2
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(1227..2192)
DNA (966bp) protein (322aa)
UDP-N-acetylglucosamine 2-epimerase Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B8X9_9EURY
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AIY90186.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
RifSed_csp2_16ft_3_scaffold_6152_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2343..3269)
DNA (927bp) protein (309aa)
Glycosyl transferase, group 2 family protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C041_METCG
dolichyl-phosphate mannose synthase related protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_6152_4
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3681..4490
DNA (810bp) protein (270aa)
CAAX amino terminal protease family Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0B4_METHD
CAAX amino terminal protease family
CAAX amino terminal protease family {ECO:0000313|EMBL:AGB49704.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_6152_5

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4487..5245
DNA (759bp) protein (253aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JCM0_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38774.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
b2256; hypothetical protein
RifSed_csp2_16ft_3_scaffold_6152_6
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5223..6374
DNA (1152bp) protein (384aa)
Glycosyltransferase Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYE1_METHD
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGB49705.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
RifSed_csp2_16ft_3_scaffold_6152_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6384..7589)
DNA (1206bp) protein (402aa)
ABC-type transport system permease protein (Homolog to LolDCE lipoprotein release factor) Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EQ0_HALWD
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KCZ72802.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
lolE; ABC transporter permease
RifSed_csp2_16ft_3_scaffold_6152_8
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7629..8495)
DNA (867bp) protein (289aa)
UPI0003D1AA0B related cluster Tax=unknown RepID=UPI0003D1AA0B
Putative membrane protein {ECO:0000313|EMBL:ETA66754.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6152_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8492..9661)
DNA (1170bp) protein (390aa)
ABC-type transport system permease protein (Homolog to LolDCE lipoprotein release factor) Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EP9_HALWD
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:KCZ72810.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
lolC; ABC transporter permease
RifSed_csp2_16ft_3_scaffold_6152_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9651..10331)
DNA (681bp) protein (227aa)
ABC transporter Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00038137FE
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:KCZ72811.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-type antimicrobial peptide transport system, ATPase component
RifSed_csp2_16ft_3_scaffold_6152_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10333..11142)
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72813.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6152_12
unknown

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11446..12090
DNA (645bp) protein (215aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_6152_13
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12349..12594
DNA (246bp) protein (82aa)
UPI0003D1C837 related cluster Tax=unknown RepID=UPI0003D1C837
Uncharacterized protein {ECO:0000313|EMBL:ETA66751.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_6152_14
unknown

Not on your lists

12587..13255
DNA (669bp) protein (223aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_6152_15
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(13741..13941)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YJV1_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
RifSed_csp2_16ft_3_scaffold_6152_16
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(13938..14387)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SKI4_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
RifSed_csp2_16ft_3_scaffold_6152_17
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14462..14929
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB62446.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
RifSed_csp2_16ft_3_scaffold_6152_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14977..15120
DNA (144bp) protein (48aa)
Cohesin domain {ECO:0000313|EMBL:KCZ72606.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 18 items

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