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RifSed_csp2_16ft_3_scaffold_14107

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_14107_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2..298)
DNA (297bp) protein (99aa)
UPI0003D1B21D related cluster Tax=unknown RepID=UPI0003D1B21D
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_14107_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(295..1476)
DNA (1182bp) protein (394aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2V0_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_14107_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1473..1952)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNQ1_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_14107_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1933..2604)
DNA (672bp) protein (224aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_14107_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2570..3136)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BC5_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_14107_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3226..4011)
DNA (786bp) protein (262aa)
Transcriptional regulator, ArsR family Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNE1_METZD
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:KCZ71208.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ArsR family transcriptional regulator
RifSed_csp2_16ft_3_scaffold_14107_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4073..5149)
DNA (1077bp) protein (359aa)
Signal recognition particle receptor FtsY Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZJ8_METBU
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
signal recognition particle-docking protein FtsY
RifSed_csp2_16ft_3_scaffold_14107_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5158..5604)
DNA (447bp) protein (149aa)
Prefoldin subunit alpha Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC10_METMS
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
prefoldin, subunit alpha
RifSed_csp2_16ft_3_scaffold_14107_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(5601..5780)
DNA (180bp) protein (60aa)
50S ribosomal protein L18Ae Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EC11_METMS
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
50S ribosomal protein LX
RifSed_csp2_16ft_3_scaffold_14107_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5954..6214)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71414.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_14107_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6337..6969)
DNA (633bp) protein (211aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000360FC5D
Putative DNA binding protein {ECO:0000313|EMBL:KCZ71413.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Bacterio-opsin activator HTH domain protein
RifSed_csp2_16ft_3_scaffold_14107_12
unknown

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7159..7374
DNA (216bp) protein (72aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_14107_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7419..7781
DNA (363bp) protein (121aa)
Lipoate-protein ligase A Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TG70_THEC1
Bacterial lipoate protein ligase C-terminus {ECO:0000313|EMBL:KCZ73435.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Lipoate-protein ligase A
RifSed_csp2_16ft_3_scaffold_14107_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7783..8526
DNA (744bp) protein (248aa)
Lipoate-protein ligase A {ECO:0000313|EMBL:KCZ73434.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KCZ73434.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
lipoate-protein ligase A (EC:2.7.7.63)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RifSed_csp2_16ft_3_scaffold_14107_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8511..9548
DNA (1038bp) protein (346aa)
bchP; putative geranylgeranyl reductase (EC:1.3.1.-)
Digeranylgeranylglycerophospholipid reductase Tax=Uncultured methanogenic archaeon RC-I RepID=GGR_UNCMA
Geranylgeranyl reductase family protein {ECO:0000313|EMBL:KCZ73433.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying 15 items

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