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RifSed_csp2_16ft_3_scaffold_4044

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_4044_1

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comp(1..216)
DNA (216bp) protein (72aa)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003608202
Marine sediment metagenome DNA, contig: S01H4_L04034 {ECO:0000313|EMBL:GAG80914.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyltransferase group 2 family protein
RifSed_csp2_16ft_3_scaffold_4044_2
unknown

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comp(317..466)
DNA (150bp) protein (50aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_4044_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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781..2070
DNA (1290bp) protein (430aa)
Putative uncharacterized protein Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BBD2_METIK
Uncharacterized protein {ECO:0000313|EMBL:KCZ70611.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_4044_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2146..3264
DNA (1119bp) protein (373aa)
Nitrogenase protein Tax=Methanosarcina mazei RepID=M1Q750_METMZ
Putative methanogenesis marker 13 metalloprotein {ECO:0000313|EMBL:KCZ71646.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_4044_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3257..4048
DNA (792bp) protein (264aa)
UPI0003D1A1CA related cluster Tax=unknown RepID=UPI0003D1A1CA
nitrogenase subunit NifH (ATPase)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4044_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4053..4310)
DNA (258bp) protein (86aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos23H9 RepID=Q64CF6_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_4044_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4316..4633)
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos23H9 RepID=Q64CF7_9ARCH
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_4044_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4982..6409
DNA (1428bp) protein (476aa)
Probable cobyrinic acid A,C-diamide synthase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK00_METAC
cbiA2; cobyrinic acid a,c-diamide synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4044_9
unknown

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6485..6967
DNA (483bp) protein (161aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_4044_10
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6964..7965
DNA (1002bp) protein (334aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJK13567.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
RifSed_csp2_16ft_3_scaffold_4044_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8098..8406
DNA (309bp) protein (103aa)
Sec-independent protein translocase protein TatA Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTX5_METMA
Sec-independent protein translocase TatA {ECO:0000313|EMBL:KCZ70456.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
tatA; Sec-independent protein translocase
RifSed_csp2_16ft_3_scaffold_4044_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8408..8722
DNA (315bp) protein (105aa)
Twin-arginine translocation protein, TatA/E family subunit Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNR8_ARCVS
Twin arginine-targeting protein translocase, TatA/E family {ECO:0000313|EMBL:KCZ70457.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
twin-arginine translocation protein TatA
RifSed_csp2_16ft_3_scaffold_4044_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8728..9138)
DNA (411bp) protein (137aa)
UPI0003D1B233 related cluster Tax=unknown RepID=UPI0003D1B233
Uncharacterized protein {ECO:0000313|EMBL:KCZ70458.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_4044_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9282..10061)
DNA (780bp) protein (260aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
Circadian phase modifier Tax=Methanosarcina mazei RepID=M1Q429_METMZ
NCAIR mutase-like protein {ECO:0000313|EMBL:KCZ71746.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_4044_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10259..11398)
DNA (1140bp) protein (380aa)
Cell division protein FtsZ Tax=Methanolobus psychrophilus R15 RepID=K4MAR5_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cell division protein FtsZ
RifSed_csp2_16ft_3_scaffold_4044_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11415..11639)
DNA (225bp) protein (75aa)
Putative transcriptional regulator, CopG/Arc/MetJ family Tax=Methanoregula boonei (strain 6A8) RepID=A7I862_METB6
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain {ECO:0000313|EMBL:KCZ71749.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
RifSed_csp2_16ft_3_scaffold_4044_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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11844..13736
DNA (1893bp) protein (631aa)
Threonine--tRNA ligase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E858_METEZ
threonyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4044_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

13821..14204
DNA (384bp) protein (128aa)
30S ribosomal protein S8e Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW41_METCG
rpsH; 30S ribosomal protein S8
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4044_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14201..15496)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JF96_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_4044_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15585..16346)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHP5_METPE
Uncharacterized protein {ECO:0000313|EMBL:KCZ72012.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_4044_21
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

16349..16813
DNA (465bp) protein (155aa)
aprE; extracellular alkaline serine protease (EC:3.4.21.-)
peptidase S8 Tax=Bacillus sp. m3-13 RepID=UPI0001E8904B
Tax=RBG_16_Chloroflexi_51_9_curated
RifSed_csp2_16ft_3_scaffold_4044_22
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(16857..18644)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQX1_ARCVS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEA47777.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
RifSed_csp2_16ft_3_scaffold_4044_23
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(18641..19210)
DNA (570bp) protein (190aa)
Protein LemA Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=LEMA_METJA
LemA protein
Protein LemA; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
RifSed_csp2_16ft_3_scaffold_4044_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19304..19714
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK61_METAC
Putative membrane protein {ECO:0000313|EMBL:KCZ70875.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying 24 items

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