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RifSed_csp2_16ft_3_scaffold_8219

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_8219_1
unknown

Not on your lists

comp(408..593)
DNA (186bp) protein (62aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_8219_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(832..1179)
DNA (348bp) protein (116aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NH07_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU56754.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
RifSed_csp2_16ft_3_scaffold_8219_3
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1206..1436)
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NH08_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:ETW95558.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_8219_4

Not on your lists

1587..3200
DNA (1614bp) protein (538aa)
Transposase Tax=uncultured archaeon GZfos12E2 RepID=Q64EA4_9ARCH
Transposase {ECO:0000313|EMBL:AAU82273.1}; species="Archaea; environmental samples.;" source="uncultured archaeon GZfos12E2.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_8219_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3457..3759)
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_8219_6
unknown

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4125..4292
DNA (168bp) protein (56aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_8219_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4338..5780
DNA (1443bp) protein (481aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ98_METZD
Putative hydrocarbon binding protein (Contains V4R domain) {ECO:0000313|EMBL:KCZ70605.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_8219_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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5777..6661
DNA (885bp) protein (295aa)
Uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Formate dehydrogenase-like protein cytochrome b subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_8219_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6663..7469
DNA (807bp) protein (269aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_8219_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7475..8524)
DNA (1050bp) protein (350aa)
Glutamate dehydrogenase/leucine dehydrogenase {ECO:0000313|EMBL:KCZ70444.1}; EC=1.4.1.9 {ECO:0000313|EMBL:KCZ70444.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
leucine dehydrogenase (EC:1.4.1.9)
Leucine dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SH64_9BACT
RifSed_csp2_16ft_3_scaffold_8219_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8606..10048
DNA (1443bp) protein (481aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ98_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73393.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_8219_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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10119..11792
DNA (1674bp) protein (558aa)
amine oxidase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
amine oxidase
Tax=CSP1_2_Dadabacteria
RifSed_csp2_16ft_3_scaffold_8219_13
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11989..12306
DNA (318bp) protein (106aa)
Protein belonging to Uncharacterized protein family UPF0175 Tax=uncultured organism RepID=M1P1S6_9ZZZZ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_8219_14

Not on your lists

12306..12788
DNA (483bp) protein (161aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035FE4E8
Marine sediment metagenome DNA, contig: S03H2_S20032 {ECO:0000313|EMBL:GAH89728.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 14 items

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