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RifSed_csp2_16ft_3_scaffold_610_20

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 20554..20781

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ72928.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 75.0
  • Bit_score: 144
  • Evalue 4.40e-32
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 80.0
  • Bit_score: 56
  • Evalue 3.20e-06
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 73.0
  • Bit_score: 56
  • Evalue 1.10e-05

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 228
ATGGAAAGGATAACGATCAGCGCGAAAGGGCAGATAGTCATACCTGCCAGGATCAGGAAAAAGTTCGGGCTTAAGAAAGGCCAGAAGCTTGCGATCATGGAAGAGGACGGCTGCATTAAAATGCTGCCGCCCACAGATATTACCACGCTCTGCGGGACTTGGTCAGACCTTGACCCGAAAGCTGTAAGAAAGAAAGTCGAAGAGATGCGCAGAGAAGACAGATATTAG
PROTEIN sequence
Length: 76
MERITISAKGQIVIPARIRKKFGLKKGQKLAIMEEDGCIKMLPPTDITTLCGTWSDLDPKAVRKKVEEMRREDRY*