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RifSed_csp2_16ft_3_scaffold_610

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_610_1
GWC2_OD1_37_73, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..1440)
DNA (1440bp) protein (480aa)
Uncharacterized protein Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L3W2_KORCO
Uncharacterized protein {ECO:0000313|EMBL:KKQ39137.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_73.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_610_2
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1752..2111)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVB3_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60385.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
RifSed_csp2_16ft_3_scaffold_610_3
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2121..2525)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Thiothrix disciformis RepID=UPI00035D324E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36890.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
RifSed_csp2_16ft_3_scaffold_610_4
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2540..3895)
DNA (1356bp) protein (452aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W404_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36889.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
RifSed_csp2_16ft_3_scaffold_610_5
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(4045..5685)
DNA (1641bp) protein (547aa)
Pro-kumamolisin, activation domain family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDR2_ACIB4
Peptidase S53 propeptide
Peptidase S53 propeptide {ECO:0000313|EMBL:ADD08138.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
RifSed_csp2_16ft_3_scaffold_610_6
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5690..8128)
DNA (2439bp) protein (813aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVC6_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60398.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
RifSed_csp2_16ft_3_scaffold_610_7
unknown

Not on your lists

comp(8125..8259)
DNA (135bp) protein (45aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_610_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

8570..8917
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MJ36_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_610_9
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8957..10579
DNA (1623bp) protein (541aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T5H0_9EURY
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EKQ54893.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
putative iron-sulfur protein MMP1067
RifSed_csp2_16ft_3_scaffold_610_10
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

10566..12230
DNA (1665bp) protein (555aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase, flavoprotein subunit Tax=Nitrospina gracilis 3/211 RepID=M1Z209_9BACT
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
RifSed_csp2_16ft_3_scaffold_610_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12300..13145
DNA (846bp) protein (282aa)
pyrK; ferredoxin-NADP(+) reductase subunit alpha (EC:1.18.1.2)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XA89_9BACT
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_610_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13133..14512
DNA (1380bp) protein (460aa)
NADPH-dependent glutamate synthase, homotetrameric {ECO:0000313|EMBL:KCZ71165.1}; EC=1.8.1.- {ECO:0000313|EMBL:KCZ71165.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Sulfide dehydrogenase (Flavoprotein) subunit SudA Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FY1_METBF
RifSed_csp2_16ft_3_scaffold_610_trna_1
unknown

Not on your lists

14564..14636
DNA (73bp)
transferRNA His
RifSed_csp2_16ft_3_scaffold_610_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14946..15218
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KE19_METBM
CoA-binding domain protein {ECO:0000313|EMBL:KCZ70464.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acyl-CoA synthetase (NDP forming)
RifSed_csp2_16ft_3_scaffold_610_14
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15323..15835)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Haloferax prahovense DSM 18310 RepID=M0GDK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ68894.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_610_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15967..16926)
DNA (960bp) protein (320aa)
hypothetical protein Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000374E0A9
putative S1 family peptidase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_610_16
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

Not on your lists

17137..18468
DNA (1332bp) protein (444aa)
Amino acid transporter Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKE3_9ARCH
Amino acid permease-associated protein {ECO:0000313|EMBL:KFM18427.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
amino acid permease
RifSed_csp2_16ft_3_scaffold_610_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18481..19029)
DNA (549bp) protein (183aa)
Rubrerythrin Tax=Methanosarcina mazei Tuc01 RepID=M1PAM6_METMZ
Rubrerythrin {ECO:0000313|EMBL:KCZ70936.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Rubrerythrin
RifSed_csp2_16ft_3_scaffold_610_18
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

19733..20065
DNA (333bp) protein (111aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY89243.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;"
RifSed_csp2_16ft_3_scaffold_610_19
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

20053..20448
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
Ribonuclease VapC Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQH3_ARCVS
VapC toxin protein
RifSed_csp2_16ft_3_scaffold_610_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20554..20781
DNA (228bp) protein (76aa)
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ72928.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AbrB family transcriptional regulator
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
RifSed_csp2_16ft_3_scaffold_610_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20806..21192
DNA (387bp) protein (129aa)
PIN domain-containing protein {ECO:0000313|EMBL:KCZ72927.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_610_22
unknown

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21217..21342
DNA (126bp) protein (42aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_610_23
unknown

Not on your lists

comp(21502..21816)
DNA (315bp) protein (105aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_610_24
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21797..23182)
DNA (1386bp) protein (462aa)
Fe-S oxidoreductase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Z3_METBF
Radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AKB50825.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
RifSed_csp2_16ft_3_scaffold_610_25
unknown

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comp(23179..23517)
DNA (339bp) protein (113aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_610_26
unknown

Not on your lists

comp(23507..23776)
DNA (270bp) protein (90aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_610_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23944..24243
DNA (300bp) protein (100aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_610_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24601..25842)
DNA (1242bp) protein (414aa)
Polysulfide reductase bin=GWC2_CP_Nitrospirae-rel_42_7 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
polysulfide reductase NrfD
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_610_29
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25839..26747)
DNA (909bp) protein (303aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein bin=GWB2_Deltaproteobacteria_65_81 species=Desulfovibrio desulfuricans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
4Fe-4S ferredoxin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 50 in total

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