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RifSed_csp2_16ft_3_scaffold_922_18

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 15269..16282

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRD9_METH6 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 605
  • Evalue 1.70e-170
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 337.0
  • Bit_score: 649
  • Evalue 1.90e-183
Transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 605
  • Evalue 4.80e-171

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1014
ATGCAAGAAGTTGAAAAAGTTAAAGAAGTCGAGAAGACAGAACGTGAAAAAATTAGAGAAGATATAAAGCTCAGGAAGGAAAAACAAAAACTCGGAGCGTTTGAAAAGGCTACTGTAGAGTGCCCTGAATGCGGAAGCCATACGCTTGTCCATGATTATGAAAGGGCAGAACTGGTCTGCAATGAGTGCGGACTGGTTGTGGATGCAGATTTCATAGATCAGGGACCTGAATGGAGGGCATTTGACCACGACCAGAGGATGAAGCGCTCAAGGGTGGGCGCACCGATGACCTATACGATCCACGATAAAGGACTCTCCACAATGATAGACTGGCGGAACCGTGATTCATACGGAAAATCAATCTCATCAAAGAGCAGGGCGCAGCTCTACCGCCTGAGAAAATGGCAGCGCCGCATCCGTGTAAGCAATGCCACTGAAAGGAATCTGGCGTTTGCTCTGTCAGAACTGGACAGGATGGCATCAGCGCTTGGTCTATCCAGGAATGTCAGGGAAACTGCAGCTGTTGTCTATCGCAAGGCTGTTGAAAAGAACCTGATCAGAGGAAGGAGCATCGAGGGCGTGGCTGCTGCAGCGCTGTATGCTGCATGCAGACAGTGCAATGTCCCAAGAACCCTGGATGAGATAGGTGAGGTCTCAAGAGTGAGCAGGAAAGAGATCGGAAGGACGTACAGATTCATCTCAAGGGAGCTTGGTCTGAAGCTCATACCCACATCCCCGATTGATTACGTCCCGCGCTTCTGCTCGGGTCTGAACCTGCGCGGAGAGGTGCAGTCAAAGGCCGTGGAGATACTCAGGCAGGCTTCTGAGAAAGAACTCACAAGCGGCAGAGGTCCAACAGGTGTGGCTGCAGCAGCAATATACATCGCTTCCATCCTGTGCGGAGACAGGAGAACGCAGCGAGAAGTGGCTGAGGTCGCAGGTATAACTGAAGTGACCATAAGGAATCGTTACAAGGAACTGGCTGAAGAGCTGGATATAGAGATCATCCTTTAA
PROTEIN sequence
Length: 338
MQEVEKVKEVEKTEREKIREDIKLRKEKQKLGAFEKATVECPECGSHTLVHDYERAELVCNECGLVVDADFIDQGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKSISSKSRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLSRNVRETAAVVYRKAVEKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIGEVSRVSRKEIGRTYRFISRELGLKLIPTSPIDYVPRFCSGLNLRGEVQSKAVEILRQASEKELTSGRGPTGVAAAAIYIASILCGDRRTQREVAEVAGITEVTIRNRYKELAEELDIEIIL*