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RifSed_csp2_16ft_3_scaffold_922_26

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(23630..24424)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTR1_METCG similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 217.0
  • Bit_score: 291
  • Evalue 5.60e-76
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 268.0
  • Bit_score: 421
  • Evalue 5.00e-115
exosome complex RNA-binding protein RRP4 similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 217.0
  • Bit_score: 291
  • Evalue 1.60e-76

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 795
ATGGACAAGAAATTAGTTATTCCGGGTGAATTTTTATCTGAAAATCCTGATCTTGCCGATGAAGGGACATATGTTGAAGATGGAAAGGTATTTTCGTCTGTAATGGGTGTGGCATCAATGAAGAACCGCATCAGGGTCGTCCCGCTCTCAGGAAAATATGTACCAAAACCAGGAGATCTGGTGATAGGTATCGTAAAAGAGGTCGCTTTTTCAAACTGGATCGTTGATATCAGATCTCCATATGAGGGACTTCTGCATATCTCGGAATATCCCAGAAGGATAGAGAGTGAGGAAATGTCAAGATACCTCAATGTGGGCGATTCCATAATGACGCTTATAAAAGATGTGGACGCAAACATGAAGATTGAGCTTACATTGAACGATCAGAGGTTAAGACCCATAAGAGAAGGACGCGTGGTTGAGGTCACACCTTCCAAAGTCCCAAGGTTGATTGGCAGGGGAGGGTCCATGATTGCAATGCTGAAAAACGAAACGAACTGCCACATCTTTGTGGGGCAGAATGGCAGGATCTGGGTTGCAGGCAAAGATAAAGGCATGGATCTGGCGGTAAGAGCAATACTTAAAATTGAACGAGAAACCCATATTTCTGGCCTGACTGAAAGAATTACCAGATTCCTGAAGGAAGAAAAAGGTGAAAAAATCATAGAACGGGAGCCCGTGGAACAGGAAACTGAAAAAATGGAAACTCAGGAAGAAAAAGAGCCCTCAGAGAAAGAAACAATGGAGGAAAAGGAGGGAGGAATTCTTGACGAGCTCCTCGGGAATGATAAATGA
PROTEIN sequence
Length: 265
MDKKLVIPGEFLSENPDLADEGTYVEDGKVFSSVMGVASMKNRIRVVPLSGKYVPKPGDLVIGIVKEVAFSNWIVDIRSPYEGLLHISEYPRRIESEEMSRYLNVGDSIMTLIKDVDANMKIELTLNDQRLRPIREGRVVEVTPSKVPRLIGRGGSMIAMLKNETNCHIFVGQNGRIWVAGKDKGMDLAVRAILKIERETHISGLTERITRFLKEEKGEKIIEREPVEQETEKMETQEEKEPSEKETMEEKEGGILDELLGNDK*