ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RifSed_csp2_16ft_3_scaffold_2334_20

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(13712..14596)

Top 3 Functional Annotations

Value Algorithm Source
RIO-like serine/threonine protein kinase fused to N-terminal HTH domain {ECO:0000313|EMBL:KCZ73154.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KCZ73154.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 288.0
  • Bit_score: 439
  • Evalue 2.60e-120
Serine/threonine protein kinase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468F1_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 302.0
  • Bit_score: 322
  • Evalue 3.30e-85
Serine/threonine protein kinase similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 302.0
  • Bit_score: 322
  • Evalue 9.30e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 885
ATGCTGGAAAATATTCCGGATATATTTCTCAACACTTCGACCAGAGAATTTCGGGTTCTTCTTGCCATAGAGAATAAAATGAAATTCTACGAATGGGTCCCGATAGAAGAAATCGCAAACTTCACAAAATATGATAGAAAAGAGGTTGAGTATATGCTTTCGATCCTTGCGAGGAAAAAACTGATCCACAGAAACATCCTTGCCTATGAAGGATACAGGATTTATTTTGATGCCTATGATCTGCTGGCATTGAAAGCCTTTGTGACCCGTGGCTCGATCAATGCCATTGGAGATGTGATCGGTGCGGGAAAGGAATCGCAAGTCTATGCTGCCACCGGCGGGATCACGAACAGGGAGGTTGCGATAAAGTTCCACAGGGAAGGAAAAACAAGTTTCAAAAAAGTGAAGGTGAAAAGGGAGCATGCAGCAGAGAAAAAACACATCTCATGGCTGTACGCATCTCGCCTTGCTGCTAAAAAGGAATATGATGCACTGAAGCTCCTTTATCCTGTGGTGAGTGTTCCGGAGCCTGTGGATCATAACAGGCATGCAATCGTGATGTCTGTGTTGAAAGGACAGGCGCTTGCCCATACAAAGGTGGACGACCCTGAGTGGTATCTGGAAGAGGTTATAAAACAGGTAAGAAATACCGCAGCGCTCGGGATAATACACGGAGATCTGAGTGAATTCAATATATTTGTCAATCCAGATGGATGTGAGATCATTGACTGGCCGCAGCATGTTACCTGCTCCCACCCGAATGCAAAAGAACTGCTTTACCGCGATATTGATAATGTCCTCACATTTTTCATGAAAAAATACAGGGCAAAAAGAGATATCAGAGAAGTGATAACAAATATAATGGAATCATGCCGGAAAAAATAA
PROTEIN sequence
Length: 295
MLENIPDIFLNTSTREFRVLLAIENKMKFYEWVPIEEIANFTKYDRKEVEYMLSILARKKLIHRNILAYEGYRIYFDAYDLLALKAFVTRGSINAIGDVIGAGKESQVYAATGGITNREVAIKFHREGKTSFKKVKVKREHAAEKKHISWLYASRLAAKKEYDALKLLYPVVSVPEPVDHNRHAIVMSVLKGQALAHTKVDDPEWYLEEVIKQVRNTAALGIIHGDLSEFNIFVNPDGCEIIDWPQHVTCSHPNAKELLYRDIDNVLTFFMKKYRAKRDIREVITNIMESCRKK*