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RifSed_csp2_16ft_3_scaffold_2424_14

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(11155..12750)

Top 3 Functional Annotations

Value Algorithm Source
ATPase, type IV secretory pathway VirB11 component like protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXM4_METHD similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 546.0
  • Bit_score: 658
  • Evalue 3.50e-186
Flagella-related protein FlaI {ECO:0000313|EMBL:AKB86138.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 545.0
  • Bit_score: 660
  • Evalue 1.70e-186
ATPase, type IV secretory pathway VirB11 component like protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 546.0
  • Bit_score: 658
  • Evalue 9.90e-187

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Taxonomy

Methanococcoides methylutens → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1596
ATGACGCTTGAAGAGGCGATAAAAAACAATCCCCATCTTGGAGCTTACGTTCGAGAGTTCAACAAGAAAAGCGGTGTTATCCCGGATTTCGTACCCCAGCTCGCAAGGGACATAGATAAGAAAAACGTTAATGTCATATATCCGATAGGAGACCCTCTGTTTATCCATATCTTTGGGACAGAGTATACTGAAATAAAATATTATGCGATCCAGCCATCCATGGACCAGGTAGAACAGGAGAAATACAGACAGATACTGGATATAATTCTGAAAAGGACACCAGAAGAACCTGCAGCAGATACCTCTGAAAAACTCAGAGAACATTTCTTCAAGCTCATAGATAAAGTGACGGTCATAGATGGAGCCGCACGCGATAAAGAAAAAATCGCAGTAACAAGAGAACAATTTGAAAAGATCAAATGCTTCATTGACTGGAACATAGTCGGGCATGCGGTAATCGAACCGGTCATCCGGGATCCATATCTTGAAGATATTCACAGCATAGGCAGGCACAGCATTTTTGTTGTCCATAAGATCTTTGGCATGCTTGAGACTAACCTTCGTTTTTCATCTGATGGGGAACTTGATGAATGGATGAGGGTCATGAGCGAGCGGATTGGAAGGCCGGTCAGCGATTTCAGACCCATAGCTGATGGTGCGCTGCCCGATGGTTCGCGTATCAATATCATATACAGCCGTGAAGTAAGCAGGCGCGGCAGTTCGTTCACGCTCAGGAAGTTCAATGCAATTCCCACAAGCATCACGCAGCTCATAAAATGGGGAAGTATCAGCGCAGAGATCGGGGCATATCTGTGGCTGTGTACAGAGAACGGCATGAACCTCTTTGTGAGCGGTGAAACAGCAAGCGGGAAAACCACGGCTCTTAATTCCATTCTTCCTTTTATCAACTCAAAAGGTAAGGTCTACAGCGTGGAGGACACTGCAGAGGTGCTGGCTCCGCAGGGAGTGTGGCAGCAGATGATCACGCGTGAGACAGGACCCAAGAACACGCAGGTGGACATGTTCTCCCTGCTCAAGCTGGCACTTCGTTCAAGGCCTGCATATGTGATCGTTGGTGAGATAAGGGGCGTAGAAGGTGCAGTGGCGTTCCAGGCAATGCAGGCAGGGAACTCTGTCATGGCGACCTTTCATGCTTCATCAGTAAAAAAGCTCATCCAGAGGATCACAGGCGACCCTATTAAGGTCCCTGTCACCTTTATTGATAACCTGCATATAGTCATGATACTGCAGGCTGTTTACAGGCAGGGTGTATTCCTTCGCCGATGCGTGTCTTTAGAAGAGATCGAGGGGTATCTTGAAGAATCTAAAGGAGTGATAACAAGAGCGGTTTTTCAGTGGGATCCTATTAATGATAGACATCATTTCCGGGGACTTAACAACAGCTACATTCTTGAGAATGTCGTGGCTCAGAAACTCGGATATGCTGATAAGAAGAAGATCTATAAAGAACTTGAACTGAGGGCAAAGATCCTTGAAAAAATGGTGGAGCAGAACATAACAGACTATTACAAGGTCAGGGATGTTATCTGGGCATTTGAGAGAAGCGGGGTTGGCGGACTGCCATTTTTAATGTAG
PROTEIN sequence
Length: 532
MTLEEAIKNNPHLGAYVREFNKKSGVIPDFVPQLARDIDKKNVNVIYPIGDPLFIHIFGTEYTEIKYYAIQPSMDQVEQEKYRQILDIILKRTPEEPAADTSEKLREHFFKLIDKVTVIDGAARDKEKIAVTREQFEKIKCFIDWNIVGHAVIEPVIRDPYLEDIHSIGRHSIFVVHKIFGMLETNLRFSSDGELDEWMRVMSERIGRPVSDFRPIADGALPDGSRINIIYSREVSRRGSSFTLRKFNAIPTSITQLIKWGSISAEIGAYLWLCTENGMNLFVSGETASGKTTALNSILPFINSKGKVYSVEDTAEVLAPQGVWQQMITRETGPKNTQVDMFSLLKLALRSRPAYVIVGEIRGVEGAVAFQAMQAGNSVMATFHASSVKKLIQRITGDPIKVPVTFIDNLHIVMILQAVYRQGVFLRRCVSLEEIEGYLEESKGVITRAVFQWDPINDRHHFRGLNNSYILENVVAQKLGYADKKKIYKELELRAKILEKMVEQNITDYYKVRDVIWAFERSGVGGLPFLM*