ggKbase home page

RifSed_csp2_16ft_3_scaffold_3610_7

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(10111..14022)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, cell cycle sensor histidine kinase PleC bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 798.0
  • Bit_score: 357
  • Evalue 3.10e-95
multi-sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 30.0
  • Coverage: 852.0
  • Bit_score: 316
  • Evalue 2.90e-83
Tax=RBG_13_Chloroflexi_48_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 939.0
  • Bit_score: 369
  • Evalue 1.10e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Chloroflexi_48_17_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3912
ATGAAACATCAGGATAATAAGGAGGAATCAATCGCTACTTTAAGGGCTGATGAAGCAGAATCCGGGCATTACCGTGAACTTTTCGAATCCGCTCCTTTTGGCTATCTGATCACAGATGCAGAAGGTATGACCCTGGAGGCTAACAGACAGGCAGAGATCATGCTCAATATCAGCACAGAGTTATTGACAGGTAAACCGCTTTCCATCTTTGTCGCCGAGAAAGAGCGAGAGGTGTTCCTGAAGCAGGTCAGCAGATTGCACAAAGAAGAAAAGATCATGTGGGAAGCTCATATACAGCCCATGTATAAAGCTCCATTCCCCGCAGCAATGACCGCTGGATCAATTCGCGACGATGCCGGGAGATTGATCGCACTGAGCTGGATGATACAGGACGTTACCGAGCGGAGAAGGACAGAGGAAGTACTCAGAGATGTTTATGATGAACTGGATGCGAGGGTCAGGGAACGAACTGCGGAGCTGGAAGAAGCCAATAAAATTCTGAGAGCCGAGATCGCGGAGCGAAGGAGGGTGGAAGAAGAACTGCAGAAAGCAAGTGATGAACTGGAAAATCGAGTTCTGGAACGAACAGCTGAACTGGAAAAATCCAATAGAACGCTGCTTGTTGAGATCATCGAACGCAAAAAGGTGGAGGAAGCCCTGAAAAAGGCTCTTGAAGATTCACGCCAGAGGAATCTGGAAATATCCATGCTGCTGGGTGGTGCGCATGCGGTACTGGAATATCATGAATTCAGGGACGCATCACGATCTTTATTTGACTCCTGCAAGAATCTGATTGGAGCCACATGCGGGTATATTGTGCTGTTGAGCAAAGATGGCACTGATAAAGAAGTGGTTTTTTCAGATCCTGATGGGCTCCAGTTCCCTGTCGACACCTTACTTCCTGTGCCAATCCGCGGAATAAGAAGAGAAGTTTCCAATTCTCATAAGGCCGTATATTACAACAACTTTACTGAAAGCGAATATGAAAATGTATTATTCGCTCCGCTCATAATCGGAAATGAGGTCGCAGGGTTGATGTGTCTTGGCAATAAACCCGGGGGGTTCAATGAAAACGATGCTCGCATGGCATCAGCATTCAGCGGACTTGCTGCAATCGCTCTGCAAAACAGTCAGACGCTGGAATCATTAAAGAACAGTGAAGAACATTTCAGATCGGTAACGCAAACAGCAAAAGATGCCATTATCACCGCTGATAGCAAAGGGAATATAATTTCCTGGAATCAAGGCGCCCAGATTATTTTCGGTTACTCAGAAGATGAGATAGCAGGGAAATCGCTCACTATCATGATGCCTGAACGGTTTTATGAATCTCACCTGAACGCAATCCAGCGATCGGTCTTAACAGGACGGCAGGTGATCGAAAAAACGGTGGAGCTGGTGGGGCTCAGAAAAGATGGGAGCGAATTCCCGATAGACCTTTCACTTGCAGCGTGGAACACAAAAAATGAAAAATTCTTCACAGGGATCATTCGCGATATCACACAACGAAAGCAGATAGAGCAGACACTTCGAGATGAGCGTGATAAGGCACAGAAATATCTTGATATTGCAGGGGTTATACTGGTGGTCATCGATTCAGATCAGAAGGTAGCCCTCATAAACAGGAAGGGATATGAGATACTGGAATACGAAGAACATGAAATAGTGGGCAGGAACTGGTTCGAGGTCTTCCTTCCTGAAAGAATCAGGGATGAAATAAAAGAAAATTTTGAGATGCTTCTGGCAGGAGAGCTTAAGCAGGCTGAATATTATGAGAATCTAATTCTGACCAGGACAGGTAAAGAAAAGATCATCGCATGGCACAATTCTATTTTAAAGGACGATGAAGGAAATATTATTGGTACACTGAGCTCAGGGGAGGACATCACGGATCGAAAGGAGGCCGAACAGCACCTGCGTGAGAGCGCTTTAATGCTTGCCCATGAGAGGGACAAGCTCCAGACACTTATAAACAGCATTACAGATGAGGTCTGGTTCTGTGATGGTGAGAGGAATCTAAGCTTTGCGAATATTGCAGCTGCCAGAGCACTTGGTTTCGAAAAAGTCGATGATCTGTATGATTCAACGTCATACTGTCTGCCTGAACTTGAGACATATTCGCCTGATGGACGTCCGTGCTCAAAAGAGGATTCGCCTCTTTTCCGCTCGCTTCGAGGAGAAACATTGAAAAATGTCGAAGAAATTGTCCGCCATCCTCTTACTGGCGAGATGCTCTATCGTGAGGTAAATTCAGCTCCCCTCATGTCAAAAGATGGAAAGATCCTGGGTGCTGTTGCTGTTGTGCGGGATATCACGGAGCGCAAGATAACAGAGAAAGAGCGAGAGCGTCTGTTCGAGTATGCGCAGATCGAGAAAAAGCATGCAGAGGATCTTGCCAGTTCTCTTAAAAAAGAGCGTGATACTCTGCAGGTGATAATGGAGAACACCGCGACCCATCTTGCATACCTTGATTCCCAGTTCAACTTCATCAGAGTGAATTCAGCATATGCCAGTGGCCAAGGTCATTCCAGGGATGAACTCATAGGAAGCAATCATTTCAGGCTTTTTCCCAGTGCTGAAAATCAGGTAATATTCGAGAGGGTCAGGGATACAGGGGAAGCTATTGAATTCAAAGCAAGACCATTCGAGTTCCCGGACCAGCCCTGGCGCGGCATCACATACTGGGACTGGACCCTCACTCCGATACGTGACGACTCAGGTCGTGTTGATCGGCTCGTGCTCTCGCTCACAGATGTGACAGAGCGCATAGAGTCAGAGAATGCGATACAGGAAGCCCGCGCATATGCTGAAAGCATAGTGGATTCGGTCTGGGAACCTCTTGTTATCCTGGATTCGGATCTGAGGGTGAAGACAGCGAATCAGGCTTTCTATGAGACTTTTAAGGTCTCGCTTGAGGAAACTCTGGAAAGATTCATCTATGAAATTGGAGACCGACAGTGGGACATTCCAGTCCTCAGGGAGCAGCTTATGGACATTATTCCTCATAATTCCAGGATCCAGAACTTCGAAGTGAACTGTGATTTCCCCCTCATCGGACAAAGAACAATGCTCCTCAATGCACGAAGGATATATCAGAAAGATATAGGCAGCATTATTCTTCTTGCAATCGAAGATATCACAGAGCGTATGAAAATAGAAGAGATACGTCTTGAGAACGAGCGCCTCACATATGCGAACAGAGCAAAATCAGATGTTCTGACCGTCATGAGCCACGAACTCCGTACACCCCTGACTTCCATTATGGGATTCTCGATCCTTTTGAAAGAAATGACGCATGGGAAACTGAATCAAAAGCAGGAATTCTATGTGGAAAATGTTCTTATAAATAGTAAGCATCTGCTTGACCTGATCAACAGCATCCTTGACCTGGCAAAAATAGAAGCAGGAAAGCTTGAACTTGTAATCGAAAAAATATCTGTATCAGAGATCATAAACGAGGTTTCAAACCTTTTAAGAGAAAAAGCGGCGATGCGCAACATAAAGTTTAAAAAGCAATTTGATCCAGAGCTCGATATCATAGAGGCTGACAGGCTGAAGTTCAAGCAAATTATTTTCAATCTCATAAGCAATGCAGTGAAATTCAGTAAGGAAAAAGGGGGAACAATCACCATAACAACCAGAAAAGAAGGGGAAATTGCAAAGATCTCTGTTGCAGATACTGGTATAGGGATAAAGGGAAAGGATTTGAAAAAGCTCTTCCAGAAGTTCGAGCAGCTTGATAAAGGGATGGCCAGAAAATATGAAGGCACGGGGCTTGGACTTGCAATAATAAAGGAGCTTGTGGAACTCCATGGGGGTAAGATCTCTGTTGAAAGCAGGTATGGCAAGGGAAGTACCTTTACCTTCACTCTCCCGATAACGGTTGAGAATCCAGTAAAAAGTTTACAATAA
PROTEIN sequence
Length: 1304
MKHQDNKEESIATLRADEAESGHYRELFESAPFGYLITDAEGMTLEANRQAEIMLNISTELLTGKPLSIFVAEKEREVFLKQVSRLHKEEKIMWEAHIQPMYKAPFPAAMTAGSIRDDAGRLIALSWMIQDVTERRRTEEVLRDVYDELDARVRERTAELEEANKILRAEIAERRRVEEELQKASDELENRVLERTAELEKSNRTLLVEIIERKKVEEALKKALEDSRQRNLEISMLLGGAHAVLEYHEFRDASRSLFDSCKNLIGATCGYIVLLSKDGTDKEVVFSDPDGLQFPVDTLLPVPIRGIRREVSNSHKAVYYNNFTESEYENVLFAPLIIGNEVAGLMCLGNKPGGFNENDARMASAFSGLAAIALQNSQTLESLKNSEEHFRSVTQTAKDAIITADSKGNIISWNQGAQIIFGYSEDEIAGKSLTIMMPERFYESHLNAIQRSVLTGRQVIEKTVELVGLRKDGSEFPIDLSLAAWNTKNEKFFTGIIRDITQRKQIEQTLRDERDKAQKYLDIAGVILVVIDSDQKVALINRKGYEILEYEEHEIVGRNWFEVFLPERIRDEIKENFEMLLAGELKQAEYYENLILTRTGKEKIIAWHNSILKDDEGNIIGTLSSGEDITDRKEAEQHLRESALMLAHERDKLQTLINSITDEVWFCDGERNLSFANIAAARALGFEKVDDLYDSTSYCLPELETYSPDGRPCSKEDSPLFRSLRGETLKNVEEIVRHPLTGEMLYREVNSAPLMSKDGKILGAVAVVRDITERKITEKERERLFEYAQIEKKHAEDLASSLKKERDTLQVIMENTATHLAYLDSQFNFIRVNSAYASGQGHSRDELIGSNHFRLFPSAENQVIFERVRDTGEAIEFKARPFEFPDQPWRGITYWDWTLTPIRDDSGRVDRLVLSLTDVTERIESENAIQEARAYAESIVDSVWEPLVILDSDLRVKTANQAFYETFKVSLEETLERFIYEIGDRQWDIPVLREQLMDIIPHNSRIQNFEVNCDFPLIGQRTMLLNARRIYQKDIGSIILLAIEDITERMKIEEIRLENERLTYANRAKSDVLTVMSHELRTPLTSIMGFSILLKEMTHGKLNQKQEFYVENVLINSKHLLDLINSILDLAKIEAGKLELVIEKISVSEIINEVSNLLREKAAMRNIKFKKQFDPELDIIEADRLKFKQIIFNLISNAVKFSKEKGGTITITTRKEGEIAKISVADTGIGIKGKDLKKLFQKFEQLDKGMARKYEGTGLGLAIIKELVELHGGKISVESRYGKGSTFTFTLPITVENPVKSLQ*