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RifSed_csp2_16ft_3_scaffold_3610

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_3610_1
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(2..4465)
DNA (4464bp) protein (1488aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3L0_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC64843.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
RifSed_csp2_16ft_3_scaffold_3610_2
unknown

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comp(4521..5735)
DNA (1215bp) protein (405aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3610_3
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(5732..6574)
DNA (843bp) protein (281aa)
ResC/HemX-like cytochrome c Tax=Geobacter metallireducens RepID=Q39Y52_GEOMG
ResC/HemX-like cytochrome c biogenesis membrane protein
Tax=BJP_IG2102_Coriobacteriales_64_17
RifSed_csp2_16ft_3_scaffold_3610_4
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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comp(6561..7970)
DNA (1410bp) protein (470aa)
ResB family protein Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A1G2_NATTJ
ResB family protein
ResB family protein {ECO:0000313|EMBL:ACB84702.1}; species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
RifSed_csp2_16ft_3_scaffold_3610_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8059..8538
DNA (480bp) protein (160aa)
thioredoxin Tax=Desulfospira joergensenii RepID=UPI0003B2F9EF
Thioredoxin domain-containing protein {ECO:0000313|EMBL:KCZ72621.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
protein disulfide-isomerase, thioredoxin-related
RifSed_csp2_16ft_3_scaffold_3610_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8519..9973)
DNA (1455bp) protein (485aa)
Radical SAM domain protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
radical SAM domain-containing protein
Tax=GWD2_Desulfuromonadales_54_10_curated
RifSed_csp2_16ft_3_scaffold_3610_7
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(10111..14022)
DNA (3912bp) protein (1304aa)
Two-component system, cell cycle sensor histidine kinase PleC bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Chloroflexi_48_17_curated
RifSed_csp2_16ft_3_scaffold_3610_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14265..14483
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71796.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3610_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(14544..15287)
DNA (744bp) protein (248aa)
Methyltransferase Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM98_THELI
methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3610_10
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(15387..15836)
DNA (450bp) protein (150aa)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
RifSed_csp2_16ft_3_scaffold_3610_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(15936..16337)
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72747.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3610_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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16399..17067
DNA (669bp) protein (223aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3610_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17140..17892
DNA (753bp) protein (251aa)
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:KCZ72700.1}; EC=3.1.1.45 {ECO:0000313|EMBL:KCZ72700.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Dienelactone hydrolase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL46_METH6
Dienelactone hydrolase
RifSed_csp2_16ft_3_scaffold_3610_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(17899..18516)
DNA (618bp) protein (206aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5J4_METSW
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3610_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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18602..19615
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIS3_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3610_16
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19644..19757
DNA (114bp) protein (38aa)
Coenzyme F390 synthetase Tax=Methanosarcina mazei Tuc01 RepID=M1QGZ9_METMZ
Coenzyme F390 synthetase
Coenzyme F390 synthetase {ECO:0000313|EMBL:AGF96269.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
Displaying 16 items

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