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RifSed_csp2_16ft_3_scaffold_3858_4

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 1959..2606

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KCZ70925.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KCZ70925.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 214.0
  • Bit_score: 364
  • Evalue 5.90e-98
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 187.0
  • Bit_score: 260
  • Evalue 3.20e-67
DNA-directed RNA polymerase, subunit E Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS3_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 187.0
  • Bit_score: 259
  • Evalue 1.90e-66

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 648
ATGTATAAAAAAATGAGATTGGCAGACACGGTAAGAATTGCACCAGAATTACTTGGTGACCCCGTAGAGGGTGCAGTCAAGCTCGCTTTGCGCGATAAACTTGAAGGACTGGTGGACAAGAACATAGGAGCTATTGTGGTGATAATTGATGTGATAGAAGTTGGAGAAGGACATATATTAGCAGGGGATGCAGGAGTGTATTATGACACTGTTTTTGATGCAATCACATTTATGCCTGAGATGCAGGAGATCATCGAGGGTGTTGTTCTGGAAGTCGTCGAATTTGGAATATTCGTGGGCATAGGACCTCTTGACGGTCTCGTGCATGTGAGCCAGCTCACAGATGAATATGTCAGCTATGATGAAAAGAATTCAAGATTGATAACACGGGAATCAGGCAGATCCATAACTGTAGGAGACCGTATCAGAGCGAGAATAGTAGCGGTCAGCCTGAATGAGCGCGAGCCCAGGGATAGCAAGATCGGGTTCACCATGCGCCAGCATGCACTGGGTAAAATCGAATGGCTTGAAGAGGCACGTAAACCGAAAGAGAGCGGCGAAGAAAAAGAATCGAAGCCAAAGAAGAAAAAGAAAGAGGAAAAGAAGGAAGAGAAGAAACAGGAAGATTCTAAACCAGAGGGCGCATAA
PROTEIN sequence
Length: 216
MYKKMRLADTVRIAPELLGDPVEGAVKLALRDKLEGLVDKNIGAIVVIIDVIEVGEGHILAGDAGVYYDTVFDAITFMPEMQEIIEGVVLEVVEFGIFVGIGPLDGLVHVSQLTDEYVSYDEKNSRLITRESGRSITVGDRIRARIVAVSLNEREPRDSKIGFTMRQHALGKIEWLEEARKPKESGEEKESKPKKKKKEEKKEEKKQEDSKPEGA*