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RifSed_csp2_16ft_3_scaffold_3858

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_3858_1
unknown

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3..119
DNA (117bp) protein (39aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_3858_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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340..1566
DNA (1227bp) protein (409aa)
Translation initiation factor 2 subunit gamma Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TT8_METBU
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
translation initiation factor IF-2 subunit gamma
RifSed_csp2_16ft_3_scaffold_3858_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1567..1935
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPS8_METZD
PilT domain protein {ECO:0000313|EMBL:KCZ70924.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3858_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1959..2606
DNA (648bp) protein (216aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KCZ70925.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KCZ70925.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit E Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FS3_METBF
RifSed_csp2_16ft_3_scaffold_3858_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2606..2791
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BU98_METCG
rpoE2; DNA-directed RNA polymerase subunit E'
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3858_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2793..3329
DNA (537bp) protein (179aa)
UPF0218 protein Mbur_2282 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Y2282_METBU
UPF0218 protein ANME2D_02954 {ECO:0000256|HAMAP-Rule:MF_00590}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3858_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3329..3700
DNA (372bp) protein (124aa)
30S ribosomal protein S24e Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I896_METCZ
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rps24e; 30S ribosomal protein S24
RifSed_csp2_16ft_3_scaffold_3858_8
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4433..5509
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HV64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88490.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3858_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5518..6636
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HVJ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88491.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
RifSed_csp2_16ft_3_scaffold_3858_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(7096..9579)
DNA (2484bp) protein (828aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHE0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79393.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
pentapeptide repeat-containing protein
RifSed_csp2_16ft_3_scaffold_3858_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9798..10538)
DNA (741bp) protein (247aa)
Thermophilic glucose-6-phosphate isomerase-like enzyme {ECO:0000313|EMBL:KCZ72664.1}; EC=5.3.1.9 {ECO:0000313|EMBL:KCZ72664.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
gpi; Thermophilic glucose-6-phosphate isomerase (EC:5.3.1.9)
Thermophilic glucose-6-phosphate isomerase Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6P8_METCZ
RifSed_csp2_16ft_3_scaffold_3858_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10558..11154)
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NNR4_9DELT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_3858_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(11151..12131)
DNA (981bp) protein (327aa)
Cytochrome c assembly protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5A5_DESAT
cytochrome c assembly protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12131..12553)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPA5_METH6
UPF0201 protein ANME2D_01094 {ECO:0000256|HAMAP-Rule:MF_01112}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3858_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12550..13089)
DNA (540bp) protein (180aa)
UPF0200 protein Mzhil_2009 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL30_METZD
Dephospho-CoA kinase {ECO:0000313|EMBL:KCZ72662.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_3858_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13168..14379
DNA (1212bp) protein (404aa)
26S proteasome subunit P45 family Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXT6_METHD
26S proteasome subunit P45 family {ECO:0000313|EMBL:KCZ72996.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
26S proteasome subunit P45 family
RifSed_csp2_16ft_3_scaffold_3858_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14391..14609)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72995.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3858_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14677..14997
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72994.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp2_16ft_3_scaffold_3858_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(15038..15730)
DNA (693bp) protein (231aa)
Glycosyl transferase family 2 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEM4_METPE
family 2 glycosyl transferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

15801..16457
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEM5_METPE
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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16530..17615
DNA (1086bp) protein (362aa)
Radical SAM domain protein Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GEM6_METPE
radical SAM protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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17612..18409
DNA (798bp) protein (266aa)
Methyltransferase type 11 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QLT8_CHLP8
type 11 methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18544..18702
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_3858_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18913..19173
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos37B2 RepID=Q648N9_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 24 items

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