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RifSed_csp2_16ft_3_scaffold_4325_10

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 9576..10337

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 253.0
  • Bit_score: 406
  • Evalue 1.60e-110
Ribosomal RNA large subunit methyltransferase E Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RLME_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 257.0
  • Bit_score: 337
  • Evalue 1.10e-89
ftsJ; methyltransferase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 257.0
  • Bit_score: 337
  • Evalue 3.10e-90

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 762
ATGCCCAGGGACAGAAGGGATTATTTCTACAGAAAAGCCAGGAAAGAGGGCTACCGCTCACGTGCTGCATTTAAACTGAAGCAGATAAGTGAAAAGTTCAACCTGATCAAGAAAGGGAATACGGTGGTTGACCTTGGCGCAGCGCCCGGAGGATGGCTGCAGGTGGCTAAAGAGCTTTCTGGTGGAAAAGTCGTGGGCGTGGATCTGCTTCAAATAGAGGAGATCGAAGGTGTGGAGACGATCAAAGGGGATATTCGCCTCGATGCTACCGTGGAAAAAATCAGAGAGAAAATCAAAGAGGGTGCAGATGTGGTACTGTGCGATGCAGCCCCGAATCTCTCAGGTAACTGGAGCTATGACCATGCCCGTTCCATAGATCTTGCCTCCTCTGCCCTTGAGTGCGCAAGGAAGATACTGAAGACAGGAGGCGGGTTCGCCGTAAAGGTCTTCCAGGGCGATATGTTCCCGGGTTATCTTGATGAAATGCGCACATATTTTGCGAAAGTGCAGGCTTTCTCACCTGAAGCTTCACGAAAGCCGAGCGCTGAGATCTATGTCATTGGCAGGGATTTACTACCGGAAGTTGTGAGGTTGAACCAGGAGTACCAGGTCGTCATAGAAGATGTGGGAGCCGGCGGAGACGGGATAGCCAGGATCGAGGATTTTGTGGTGTTTGTGAAAGGCGCAATAAAAGGGGAGAAGCTGAGAATCAGGATCCGTTCTGTCAAACCAAATTTTGCATTCGGGGAAAAAATCGAATGA
PROTEIN sequence
Length: 254
MPRDRRDYFYRKARKEGYRSRAAFKLKQISEKFNLIKKGNTVVDLGAAPGGWLQVAKELSGGKVVGVDLLQIEEIEGVETIKGDIRLDATVEKIREKIKEGADVVLCDAAPNLSGNWSYDHARSIDLASSALECARKILKTGGGFAVKVFQGDMFPGYLDEMRTYFAKVQAFSPEASRKPSAEIYVIGRDLLPEVVRLNQEYQVVIEDVGAGGDGIARIEDFVVFVKGAIKGEKLRIRIRSVKPNFAFGEKIE*