ggKbase home page

RifSed_csp2_16ft_3_scaffold_4542_8

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 4328..5350

Top 3 Functional Annotations

Value Algorithm Source
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 337.0
  • Bit_score: 570
  • Evalue 8.60e-160
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59 1.2.1.12) similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 337.0
  • Bit_score: 449
  • Evalue 7.60e-124
UPI0003D1B3C2 related cluster Tax=unknown RepID=UPI0003D1B3C2 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 336.0
  • Bit_score: 453
  • Evalue 1.10e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1023
ATGAAAGCAAAAGTGGCAATCAACGGGTACGGGACTATCGGTAAACGCGTGGCTGATGCTGTTGCTCTTCAGGAGGATATGGAAATTGCAGGTGTAGTGAAAACAAGACCGAGTTTTGAAGCCCGCATCGCGAAAAAGAAAGGTTACTCGCTTTATTCGGCATCTGAGGACAATATCGCGGATTTTGAGAAATCAAAGATCGAGATCAGCGGTACGCTTGATGAGTTGCTGGATAAAGCTGATATCGTGATTGATGCCACTCCCGGGAATACAGGTGAGGAATACAGGAAACTGTATCAAGAACATGGTATCAGGGCTATCTGGCAGGGTGGAGAAGAGCACGAACTTGCTGGTTTCTCCTTCAATTCAGAGGCGAATTACGATAGAGCTCTGGGCAGGGATCTTGCAAGGGTGGTCTCATGCAATACAACAGGGCTTGTGAGGGTGCTTTATGCGCTCGATACCGCGTATGGCGTAAAAAAAGCCAGGGTGACATTGATGAGGAGGGCAGCAGATCCGAACGATATAAAGACAGGTCCGATAAACGCCCTTGTTCCTGATCCCATCAAACTGCCCTCGCACCATGGTCCTGATGTGAACTCGATCCTTCCTGATATAGATATCACGACCATGGCTGTCAAGACCTCAACCACGCTCATGCACCTCCATGCTGTCAATCTAGAATTGAAAGAGGAATCCAGCCAGGATGAGATCATAAGGCTTTTTGAAGAAAGACCCCGCATCAGGCTTGTGAACAGCAAGGACAGGATAAAATCCACAGCCGAAGCGATGGAACTCGCAAAGGATATGGGGAGACCAAGAGGCGACATGTGGGAGAATGTATTGTGGAAGGATTCGATCACTATTGATAAAGGAGAGCTGTACTTCTTCCAGGCGATACACCAGGAAGCTGATGTTGTCCCTGAGAATGTTGATGCCATACGGGCAATGCTGGAACTTGAAATGGATGGGGCAAAATCCATAGAAAAGACGAACAAAGCGCTCGAGCTTATGACCTCGTAA
PROTEIN sequence
Length: 341
MKAKVAINGYGTIGKRVADAVALQEDMEIAGVVKTRPSFEARIAKKKGYSLYSASEDNIADFEKSKIEISGTLDELLDKADIVIDATPGNTGEEYRKLYQEHGIRAIWQGGEEHELAGFSFNSEANYDRALGRDLARVVSCNTTGLVRVLYALDTAYGVKKARVTLMRRAADPNDIKTGPINALVPDPIKLPSHHGPDVNSILPDIDITTMAVKTSTTLMHLHAVNLELKEESSQDEIIRLFEERPRIRLVNSKDRIKSTAEAMELAKDMGRPRGDMWENVLWKDSITIDKGELYFFQAIHQEADVVPENVDAIRAMLELEMDGAKSIEKTNKALELMTS*