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RifSed_csp2_16ft_3_scaffold_24237_11

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 4531..4752

Top 3 Functional Annotations

Value Algorithm Source
PilT protein domain protein Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S818_METSF similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 71.0
  • Bit_score: 81
  • Evalue 2.40e-13
PilT protein domain protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 71.0
  • Bit_score: 81
  • Evalue 6.90e-14
PilT protein domain protein {ECO:0000313|EMBL:ADC69178.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 71.0
  • Bit_score: 81
  • Evalue 3.40e-13

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Taxonomy

Methanocaldococcus sp. FS406-22 → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 222
ATGCTGGACAGCCTTGAAACATGCGATTTTGATAAGAAGGCTGGTAGAATCGGCGGATATATATTTAAGGATTTGAAGAAAGCAGGAAAGATGCCAAAGATAAAAGACCTTTTGATTGCTTCCACCTGTATAGCCAACAATAAAAAGCTGATAACAGGCGATGGTGATTTCGAGTCTTTTAAGAAATATGGGCTGGATGCAGAAATCATATCGGAATCTTGA
PROTEIN sequence
Length: 74
MLDSLETCDFDKKAGRIGGYIFKDLKKAGKMPKIKDLLIASTCIANNKKLITGDGDFESFKKYGLDAEIISES*