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RifSed_csp2_16ft_3_scaffold_24237

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_16ft_3_scaffold_24237_1

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comp(2..136)
DNA (135bp) protein (45aa)
Marine sediment metagenome DNA, contig: S06H3_L04169 {ECO:0000313|EMBL:GAI05452.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RifSed_csp2_16ft_3_scaffold_24237_2
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1124..1339)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LM67_METBM
hypothetical protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
RifSed_csp2_16ft_3_scaffold_24237_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1852..2196
DNA (345bp) protein (115aa)
RNA methyltransferase Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B4C0F2
DNA methylase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp2_16ft_3_scaffold_24237_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2256..2456
DNA (201bp) protein (67aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_24237_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2449..2664
DNA (216bp) protein (72aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp2_16ft_3_scaffold_24237_6
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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2668..2931
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BD12_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK60903.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
RifSed_csp2_16ft_3_scaffold_24237_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3123..3347)
DNA (225bp) protein (75aa)
Putative periplasmic or secreted lipoprotein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GHW0_9CYAN
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:KCZ72042.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_24237_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3344..3544)
DNA (201bp) protein (67aa)
Uncharacterized protein family UPF0150 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRI9_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70900.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp2_16ft_3_scaffold_24237_9
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4167..4382
DNA (216bp) protein (72aa)
Putative antitoxin TERMP_00310 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIL3_THEBM
hypothetical protein
Putative antitoxin BD01_1449 {ECO:0000256|HAMAP-Rule:MF_00794}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
RifSed_csp2_16ft_3_scaffold_24237_10
unknown

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4373..4474
DNA (102bp) protein (34aa)

This feature has no annotations

RifSed_csp2_16ft_3_scaffold_24237_11
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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4531..4752
DNA (222bp) protein (74aa)
PilT protein domain protein Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S818_METSF
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ADC69178.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
RifSed_csp2_16ft_3_scaffold_24237_12
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5234..6898)
DNA (1665bp) protein (555aa)
Transposase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH40_METAC
Mobile element protein
Mobile element protein {ECO:0000313|EMBL:AKB43901.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
Displaying 12 items

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