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RifSed_csp1_16ft_3_scaffold_6711

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_6711_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..914)
DNA (912bp) protein (304aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J8_METTP
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:KCZ72076.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_6711_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(862..1545)
DNA (684bp) protein (228aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J8_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6711_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1585..2088)
DNA (504bp) protein (168aa)
Heat shock protein Hsp20 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A035_FERFK
heat shock protein Hsp20
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6711_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2109..2741)
DNA (633bp) protein (211aa)
Transcriptional regulator, ArsR family Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46E09_METBF
Archaeal heat shock regulator, ArsR family
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6711_5
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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comp(3029..3412)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXP4_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP74689.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_6711_6
unknown

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comp(3472..3747)
DNA (276bp) protein (92aa)

This feature has no annotations

RifSed_csp1_16ft_3_scaffold_6711_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3814..5139)
DNA (1326bp) protein (442aa)
Peptidase U62 modulator of DNA gyrase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8W3_METEZ
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ71048.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
peptidase U62 modulator of DNA gyrase
RifSed_csp1_16ft_3_scaffold_6711_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5147..7054)
DNA (1908bp) protein (636aa)
Lon-related putative ATP-dependent protease {ECO:0000313|EMBL:KCZ71049.1}; EC=3.4.21.- {ECO:0000313|EMBL:KCZ71049.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Lon family peptidase with N terminal transmembrane domain Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XJ7_METBU
ATP-dependent protease Lon
RifSed_csp1_16ft_3_scaffold_6711_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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7231..8331
DNA (1101bp) protein (367aa)
Zinc metalloprotease Tax=Methanosarcina mazei RepID=M1QIE6_METMZ
Zinc metalloprotease
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_6711_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8333..9478
DNA (1146bp) protein (382aa)
TraB family protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VA4_METBU
TraB family protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 10 items

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