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RifSed_csp1_16ft_3_scaffold_15984

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_15984_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..122
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70287.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_15984_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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139..399
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70287.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_15984_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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472..1695
DNA (1224bp) protein (408aa)
Pyrrolo-quinoline quinone repeat-containing protein Tax=Methanobacterium sp. MB1 RepID=U6E9N7_9EURY
WD40-like repeat {ECO:0000313|EMBL:KCZ72883.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
pyrrolo-quinoline quinone repeat-containing protein
RifSed_csp1_16ft_3_scaffold_15984_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1709..2875)
DNA (1167bp) protein (389aa)
Geranylgeranyl diphosphate reductase (EC:1.3.1.83)
Uncharacterized protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PRY9_METMA
Geranylgeranyl reductase family protein {ECO:0000313|EMBL:KCZ70681.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_15984_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2950..3432
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E798_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ70680.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_15984_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3425..3898
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5F8_METTP
Uncharacterized protein {ECO:0000313|EMBL:KCZ70679.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_15984_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3876..4154)
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYQ6_METPS
rpoL; DNA-directed RNA polymerase subunit L
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_15984_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4163..4705)
DNA (543bp) protein (181aa)
Putative RNA-binding protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N2_METCZ
RNA-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_15984_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4938..5507)
DNA (570bp) protein (190aa)
Putative RNA methylase {ECO:0000313|EMBL:KCZ70676.1}; EC=2.1.1.- {ECO:0000313|EMBL:KCZ70676.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribosomal L11 methyltransferase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9E5_METEZ
ribosomal L11 methyltransferase
RifSed_csp1_16ft_3_scaffold_15984_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(5580..6095)
DNA (516bp) protein (172aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_15984_11
unknown

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comp(6049..6141)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 11 items

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