ggKbase home page

RifSed_csp1_16ft_3_scaffold_14177

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_14177_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3..158
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72095.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_14177_2
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

257..856
DNA (600bp) protein (200aa)
Response regulator receiver protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPY4_METZD
response regulator receiver protein
Tax=GWA2_WOR_2_47_8_curated
RifSed_csp1_16ft_3_scaffold_14177_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(880..1095)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71796.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RifSed_csp1_16ft_3_scaffold_14177_4
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1356..2162
DNA (807bp) protein (269aa)
Multi-sensor signal transduction histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4D6U9_9BACT
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:CDF83839.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
RifSed_csp1_16ft_3_scaffold_14177_5
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

2184..4682
DNA (2499bp) protein (833aa)
Sensory transduction histidine kinase {ECO:0000313|EMBL:AKG53521.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
PAS/PAC sensor hybrid histidine kinase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Signal transduction histidine kinase
RifSed_csp1_16ft_3_scaffold_14177_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4676..5584)
DNA (909bp) protein (303aa)
Parallel beta-helix repeat (Two copies) (Fragment) Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TQ53_9EURY
cell surface glycoprotein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
RifSed_csp1_16ft_3_scaffold_14177_7
unknown

Not on your lists

comp(5642..5944)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 7 items

View Taxonomy