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RifSed_csp1_16ft_3_scaffold_11549

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_11549_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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2..676
DNA (675bp) protein (225aa)
Cysteine--tRNA ligase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
cysteinyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_11549_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(663..1001)
DNA (339bp) protein (113aa)
DNA-binding protein Mpsy_0496 Tax=Methanolobus psychrophilus R15 RepID=K4MB11_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_11549_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1147..1407)
DNA (261bp) protein (87aa)
30S ribosomal protein S19e Tax=Methanothermobacter thermautotrophicus RepID=RS19E_METTH
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S19
RifSed_csp1_16ft_3_scaffold_11549_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1494..1748)
DNA (255bp) protein (85aa)
Putative RNA-binding protein containing KH domain, possibly ribosomal protein Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9U9_METCZ
Putative RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:KCZ72486.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RNA-binding protein containing KH domain, possibly ribosomal protein
RifSed_csp1_16ft_3_scaffold_11549_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1745..2113)
DNA (369bp) protein (123aa)
Roadblock/LC7 family protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KCZ72487.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Roadblock/LC7 family protein
RifSed_csp1_16ft_3_scaffold_11549_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2113..3285)
DNA (1173bp) protein (391aa)
Small GTP-binding protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ28_ARCVS
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_11549_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3287..3994)
DNA (708bp) protein (236aa)
RecA-superfamily ATPase implicated in signal transduction Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7T7_METMS
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:KCZ72489.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
RecA-superfamily ATPase implicated in signal transduction
RifSed_csp1_16ft_3_scaffold_11549_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(4090..4488)
DNA (399bp) protein (133aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUR5_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_11549_9
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4678..6618
DNA (1941bp) protein (647aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAR7_METEZ
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADI74434.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
RifSed_csp1_16ft_3_scaffold_11549_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6619..7407
DNA (789bp) protein (263aa)
ABC-2 type transporter Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR56_METH6
ABC transporter
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_11549_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7587..7787
DNA (201bp) protein (67aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
DNA polymerase II large subunit DP2 (EC:2.7.7.7)
DNA polymerase II large subunit Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8Y4_METEZ
Displaying 11 items

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