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RifSed_csp1_16ft_3_scaffold_55149

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_3_scaffold_55149_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(262..429)
DNA (168bp) protein (56aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4-hydroxy-tetrahydrodipicolinate reductase Tax=Methanolobus psychrophilus R15 RepID=K4MDX1_9EURY
dihydrodipicolinate reductase
RifSed_csp1_16ft_3_scaffold_55149_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(392..991)
DNA (600bp) protein (200aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=DAPB_METJA
Tax=RBG_16_Euryarchaeota_41_19_curated
RifSed_csp1_16ft_3_scaffold_55149_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(999..1874)
DNA (876bp) protein (292aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQ62_METH6
Dihydrodipicolinate synthase
RifSed_csp1_16ft_3_scaffold_55149_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1881..2123)
DNA (243bp) protein (81aa)
30S ribosomal protein S17e Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX53_METHD
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribosomal protein S17E
RifSed_csp1_16ft_3_scaffold_55149_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2198..2956
DNA (759bp) protein (253aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UR5_METBU
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:KCZ73569.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
RifSed_csp1_16ft_3_scaffold_55149_6
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3100..3252
DNA (153bp) protein (51aa)
Putative uncharacterized protein Tax=Clostridium RepID=D8GU36_CLOLD
hypothetical protein
Putative zinc-binding domain containing protein {ECO:0000313|EMBL:AGY75901.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
Displaying 6 items

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