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Ig9238_scaffold_124015

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig9238_scaffold_124015_1
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..161)
DNA (159bp) protein (53aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FUK1_METHJ
hypothetical protein
Transposase, IS4 family {ECO:0000313|EMBL:ABD40936.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_2
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(335..1411)
DNA (1077bp) protein (359aa)
Rhamnosyl transferase related protein Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZG0_PYRAB
rhamnosyl transferase related protein
Rhamnosyl transferase related protein {ECO:0000313|EMBL:CCE70619.1}; Uncharacterized protein {ECO:0000313|EMBL:CAB50099.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
Ig9238_scaffold_124015_3

Not on your lists

comp(1432..2886)
DNA (1455bp) protein (485aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XS41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD28062.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integral membrane protein
Ig9238_scaffold_124015_4
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3041..3949)
DNA (909bp) protein (303aa)
Methyltransferase type 12 bin=GWC2_OP3_44_8 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Tax=GWA2_Bdellovibrionales_49_15_curated
Ig9238_scaffold_124015_5
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4477..5508)
DNA (1032bp) protein (344aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ABD42759.1}; EC=4.2.1.46 {ECO:0000313|EMBL:ABD42759.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
dTDP-glucose 4,6-dehydratase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRS0_METHJ
dTDP-glucose 4,6-dehydratase
Ig9238_scaffold_124015_6
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5512..6360)
DNA (849bp) protein (283aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABD42760.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ABD42760.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
dTDP-4-dehydrorhamnose reductase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRR8_METHJ
Ig9238_scaffold_124015_7
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6385..6960)
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABD42761.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABD42761.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRS6_METHJ
Ig9238_scaffold_124015_8
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6968..7714)
DNA (747bp) protein (249aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:ABD42762.1}; EC=2.7.7.24 {ECO:0000313|EMBL:ABD42762.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Glucose-1-phosphate thymidylyltransferase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRS5_METHJ
glucose-1-phosphate thymidylyltransferase
Ig9238_scaffold_124015_9
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7850..8200)
DNA (351bp) protein (117aa)
UDP-glucose 4-epimerase Tax=Methanolinea tarda NOBI-1 RepID=G6FIF3_9EURY
GDP-D-mannose dehydratase {ECO:0000313|EMBL:KDE56432.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH98A.;"
nucleoside-diphosphate-sugar epimerase
Ig9238_scaffold_124015_10
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9167..9754)
DNA (588bp) protein (196aa)
Hydrogenase maturation factor Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HAW7_METFS
hydrogenase maturation factor
Hydrogenase maturation factor {ECO:0000313|EMBL:AGB01892.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Ig9238_scaffold_124015_11
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9834..10232
DNA (399bp) protein (133aa)
Transposase, IS4 family Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FP00_METHJ
transposase, IS4
Transposase, IS4 family {ECO:0000313|EMBL:ABD41255.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_12
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10592..10792)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FN24_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD40146.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_13
unknown

Not on your lists

comp(10789..11001)
DNA (213bp) protein (71aa)

This feature has no annotations

Ig9238_scaffold_124015_14
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12375..12545)
DNA (171bp) protein (57aa)
PilT protein domain protein Tax=Methanoplanus limicola DSM 2279 RepID=H1YZV9_9EURY
PilT protein domain protein {ECO:0000313|EMBL:EHQ34371.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
putative PIN domain nuclease
Ig9238_scaffold_124015_15
unknown

Not on your lists

comp(12637..12771)
DNA (135bp) protein (45aa)

This feature has no annotations

Ig9238_scaffold_124015_16
unknown

Not on your lists

13225..13350
DNA (126bp) protein (42aa)

This feature has no annotations

Ig9238_scaffold_124015_17
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13310..14269
DNA (960bp) protein (320aa)
Putative uncharacterized protein Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0W9_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ36262.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
Ig9238_scaffold_124015_18
unknown

Not on your lists

comp(14789..15418)
DNA (630bp) protein (210aa)

This feature has no annotations

Ig9238_scaffold_124015_19
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15540..18347)
DNA (2808bp) protein (936aa)
NHL repeat Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FPQ1_METHJ
NHL repeat-containing protein
NHL repeat {ECO:0000313|EMBL:ABD40858.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_20
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18466..18867)
DNA (402bp) protein (134aa)
PEGA Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSQ0_METHJ
hypothetical protein
PEGA {ECO:0000313|EMBL:ABD42688.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_21
unknown

Not on your lists

18901..19074
DNA (174bp) protein (58aa)

This feature has no annotations

Ig9238_scaffold_124015_22
unknown

Not on your lists

comp(19214..19846)
DNA (633bp) protein (211aa)

This feature has no annotations

Ig9238_scaffold_124015_23
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20139..20498)
DNA (360bp) protein (120aa)
PEGA Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSQ0_METHJ
hypothetical protein
PEGA {ECO:0000313|EMBL:ABD42688.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_24
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20800..23292)
DNA (2493bp) protein (831aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GE07_METPE
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACL17508.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
Ig9238_scaffold_124015_25
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23430..24521)
DNA (1092bp) protein (364aa)
Cytochrome c biogenesis protein, transmembrane region Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU06_METHJ
cytochrome c biogenesis protein, transmembrane region
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:ABD42913.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_26
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24635..25519)
DNA (885bp) protein (295aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000255|HAMAP-Rule:MF_00082}; Short=AGK {ECO:0000255|HAMAP-Rule:MF_00082};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Acetylglutamate kinase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=ARGB_METHJ
Ig9238_scaffold_124015_27
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25516..26676)
DNA (1161bp) protein (387aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FTZ9_METHJ
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_28
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26673..27155)
DNA (483bp) protein (161aa)
Putative transcriptional regulator, XRE family Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU00_METHJ
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ABD42910.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig9238_scaffold_124015_29
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27168..28154)
DNA (987bp) protein (329aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU02_METHJ
Ig9238_scaffold_124015_30
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

28482..31031
DNA (2550bp) protein (850aa)
DNA mismatch repair protein MutS Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU04_METHJ
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
DNA mismatch repair protein MutS
Displaying items 1-30 of 44 in total

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