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PLM1_60_b1_redo_sep16_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_124_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..554
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85342.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_124_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(622..1500)
DNA (879bp) protein (293aa)
ogg; 8-oxoguanine DNA glycosylase (EC:3.2.2.-)
8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:AFU58374.1}; EC=3.2.2.- {ECO:0000313|EMBL:AFU58374.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
8-oxoguanine DNA glycosylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMX3_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1510..1728)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL41_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60138.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_4
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1791..3020)
DNA (1230bp) protein (410aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16068.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_124_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3114..4376)
DNA (1263bp) protein (421aa)
Putative beta-lactamase domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA2_NITGG
beta-lactamase domain-containing protein
Putative beta-lactamase domain protein {ECO:0000313|EMBL:AFU60137.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4553..5068
DNA (516bp) protein (172aa)
Putative adenylate kinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI4_NITGG
putative nucleoside kinase, CMP and AMP kinase
Putative nucleoside kinase, CMP and AMP kinase {ECO:0000313|EMBL:AIF85332.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_124_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5177..7279
DNA (2103bp) protein (701aa)
Hydantoinase/oxoprolinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKK5_NITGG
hydantoinase/oxoprolinase
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:AFU59002.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7313..8203)
DNA (891bp) protein (297aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:AFU59257.1}; EC=2.7.6.1 {ECO:0000313|EMBL:AFU59257.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Ribose-phosphate pyrophosphokinase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL15_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8266..9186)
DNA (921bp) protein (307aa)
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Ribonuclease Z Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID03_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9372..10049)
DNA (678bp) protein (226aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM1_NITGG
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM1_60_b1_redo_sep16_scaffold_124_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10142..13642)
DNA (3501bp) protein (1167aa)
polC; DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA polymerase II large subunit Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13639..14385)
DNA (747bp) protein (249aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:0000256|HAMAP-Rule:MF_00112};; (S)-3-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Phosphoglycerol geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_00112}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Geranylgeranylglyceryl phosphate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGJ8_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14498..14866
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMR5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60512.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14909..15535
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82166.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_124_15
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15483..15857)
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP51_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16310.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_124_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16445..17671
DNA (1227bp) protein (409aa)
ORC1-type DNA replication protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6R5_NITGG
cdc6-3; cell division control protein 6
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_124_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17661..19151)
DNA (1491bp) protein (497aa)
polB1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase D small subunit (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB68_9ARCH
DNA polymerase D small subunit {ECO:0000313|EMBL:ADK25965.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM1_60_b1_redo_sep16_scaffold_124_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19238..19780
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL8_NITGG
protein of unknown function DUF95, transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AIC16332.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_124_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19807..20544)
DNA (738bp) protein (246aa)
precorrin-6Y C5,15-methyltransferase (decarboxylating) (EC:2.1.1.132)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating) {ECO:0000313|EMBL:AIF82151.1}; EC=2.1.1.132 {ECO:0000313|EMBL:AIF82151.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Cobalt-precorrin-6Y C(5,15)-methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK39_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20633..21115)
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMR1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF82153.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_124_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21269..23194
DNA (1926bp) protein (642aa)
acsA1; acetate--CoA ligase (EC:6.2.1.1)
Acetate--CoA ligase {ECO:0000313|EMBL:AFU59217.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AFU59217.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Acetate--CoA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKY8_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_22
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23228..23722)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH59_NITGG
putative protein of unknown function DUF192
Uncharacterized protein {ECO:0000313|EMBL:AIC15204.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_124_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23873..24166
DNA (294bp) protein (98aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM2_NITGG
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:AFU60503.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24283..24552)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60121.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24691..25719
DNA (1029bp) protein (343aa)
fen; flap structure-specific endonuclease (EC:3.1.-.-)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Flap endonuclease 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICB3_NITGG
PLM1_60_b1_redo_sep16_scaffold_124_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25756..27402)
DNA (1647bp) protein (549aa)
Putative thymidylate synthase ThyX Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH61_NITGG
thyX; thymidylate synthase ThyX
Putative thymidylate synthase ThyX {ECO:0000313|EMBL:AFU59220.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27548..28330
DNA (783bp) protein (261aa)
Putative archaeal cell division protein CdvA with coiled-coil domain Tax=Candidatus Nitrososphaera gargensis RepID=K0INE2_NITGG
cdvA; archaeal cell division protein CdvA with coiled-coil domain
Putative archaeal cell division protein CdvA with coiled-coil domain {ECO:0000313|EMBL:AFU59219.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

28507..28773
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59218.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_124_29
unknown

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28953..29093
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_124_30
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(29947..30930)
DNA (984bp) protein (328aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IMC5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62870.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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