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PLM1_60_b1_redo_sep16_scaffold_203

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_203_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..509
DNA (507bp) protein (169aa)
CBS domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICK7_NITGG
hypothetical protein
CBS domain-containing protein {ECO:0000313|EMBL:AFU57350.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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688..1149
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59124.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_3
uncultured marine crenarchaeote HF4000_ANIW141O9, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1163..1954)
DNA (792bp) protein (264aa)
Putative short chain dehydrogenase Tax=uncultured marine crenarchaeote HF4000_ANIW141O9 RepID=B3T671_9ARCH
Putative short chain dehydrogenase {ECO:0000313|EMBL:ABZ08080.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_ANIW141O9.;"
short-chain dehydrogenase/reductase SDR
PLM1_60_b1_redo_sep16_scaffold_203_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2003..2833)
DNA (831bp) protein (277aa)
Uncharacterized protein family UPF0104 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGY9_NITGG
hypothetical protein
Uncharacterized protein family UPF0104 {ECO:0000313|EMBL:AFU59125.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3062..3889
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59126.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3898..4851
DNA (954bp) protein (318aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037C6ED5
PLM1_60_b1_redo_sep16_scaffold_203_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4882..5742)
DNA (861bp) protein (287aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:AFU59128.1}; EC=4.2.1.55 {ECO:0000313|EMBL:AFU59128.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
3-hydroxybutyryl-CoA dehydratase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ40_NITGG
PLM1_60_b1_redo_sep16_scaffold_203_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5878..7590)
DNA (1713bp) protein (571aa)
Radical SAM domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMX9_NITGG
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:AIC14967.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7743..8510
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHL6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58403.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8883..9227
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAP2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14970.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9266..10333
DNA (1068bp) protein (356aa)
pelA; protein pelota (EC:3.1.-.-)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Protein pelota homolog Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF42_NITGG
PLM1_60_b1_redo_sep16_scaffold_203_12

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comp(10352..10687)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00038091A7
Periplasmic divalent cation tolerance protein (CutA) {ECO:0000313|EMBL:AIF12852.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_57_F01.;"
putative cutA1 divalent ion tolerance protein
PLM1_60_b1_redo_sep16_scaffold_203_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10739..11395)
DNA (657bp) protein (219aa)
Putative SNF7 protein Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ37_NITGG
putative SNF7 protein
Putative SNF7 protein {ECO:0000313|EMBL:AIC15046.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11586..13052
DNA (1467bp) protein (489aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84377.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_203_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13093..14073
DNA (981bp) protein (327aa)
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AIF82255.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Co/Zn/Cd cation transporter bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM1_60_b1_redo_sep16_scaffold_203_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14496..16697)
DNA (2202bp) protein (734aa)
Elongation factor 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK76_NITGG
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
fusA; elongation factor 2
PLM1_60_b1_redo_sep16_scaffold_203_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16911..17768
DNA (858bp) protein (286aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILR8_NITGG
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_203_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17791..18882)
DNA (1092bp) protein (364aa)
cofH3; FO synthase subunit 2 (EC:2.5.1.-)
FO synthase subunit 2 {ECO:0000313|EMBL:AFU59628.1}; EC=2.5.1.- {ECO:0000313|EMBL:AFU59628.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
FO synthase subunit 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK72_NITGG
PLM1_60_b1_redo_sep16_scaffold_203_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18979..20100
DNA (1122bp) protein (374aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
FO synthase subunit 2 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILR6_NITGG
de-hypoxanthine futalosine cyclase
PLM1_60_b1_redo_sep16_scaffold_203_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20357..21781
DNA (1425bp) protein (475aa)
hcs; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:AFU59333.1}; EC=2.3.3.10 {ECO:0000313|EMBL:AFU59333.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Hydroxymethylglutaryl-CoA synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH9_NITGG
PLM1_60_b1_redo_sep16_scaffold_203_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(21778..23007)
DNA (1230bp) protein (410aa)
threonine ammonia-lyase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase, medium form {ECO:0000313|EMBL:AIF83385.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AIF83385.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Threonine ammonia-lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID68_NITGG
PLM1_60_b1_redo_sep16_scaffold_203_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23089..23949)
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID59_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59321.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24175..24996
DNA (822bp) protein (274aa)
Putative adenylate/guanylate cyclase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB7_NITGG
putative adenylate/guanylate cyclase
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:AIC14201.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25070..25324
DNA (255bp) protein (85aa)
Putative transcriptional regulator, AsnC family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INQ4_NITGG
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU59779.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_25
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(25532..25726)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILX8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17230.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_trna_1
unknown

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comp(25752..25845)
DNA (94bp)
transferRNA Ile
PLM1_60_b1_redo_sep16_scaffold_203_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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26291..26866
DNA (576bp) protein (192aa)
ATP--cobalamin adenosyltransferase Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB60_9ARCH
putative ATP--cobalamin adenosyltransferase
Putative ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:AIC15638.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_203_27
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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27110..27688
DNA (579bp) protein (193aa)
Metal dependent phosphohydrolase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1C0_NITMS
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABX12755.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM1_60_b1_redo_sep16_scaffold_203_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

27693..28019
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57204.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_203_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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28053..29288
DNA (1236bp) protein (412aa)
LOR/SDH bifunctional protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7J4_NITGG
LOR/SDH bifunctional protein
LOR/SDH bifunctional protein {ECO:0000313|EMBL:AFU57211.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 49 in total

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