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PLM1_60_b1_redo_sep16_scaffold_574

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_574_1
unknown

Not on your lists

1..108
DNA (108bp) protein (36aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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389..1132
DNA (744bp) protein (248aa)
Putative peptidase M50 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAC4_NITGG
peptidase M50
Putative peptidase M50 {ECO:0000313|EMBL:AFU58271.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_3
Dictyostelium purpureum, Dictyostelium, Dictyosteliida, Eukaryota

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comp(1153..2508)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein Tax=Dictyostelium purpureum RepID=F1A2T7_DICPU
Putative uncharacterized protein {ECO:0000313|EMBL:EGC29490.1}; species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium purpureum (Slime mold).;"
dentin sialophosphoprotein
PLM1_60_b1_redo_sep16_scaffold_574_4
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3411..3824)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Haloferax larsenii JCM 13917 RepID=M0HEX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ82302.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_574_5
unknown

Not on your lists

comp(3811..4008)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_6
unknown

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comp(4145..4270)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_7
unknown

Not on your lists

comp(4382..4678)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_8
unknown

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5131..5508
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_9
unknown

Not on your lists

comp(5541..5888)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_10
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(6352..6912)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000361BCFD
2OG-Fe(II) oxygenase family protein {ECO:0000313|EMBL:EPG66855.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
DNA-N1-methyladenine dioxygenase
PLM1_60_b1_redo_sep16_scaffold_574_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7263..7496)
DNA (234bp) protein (78aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote RepID=Q702E3_9CREN
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AIF84350.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_574_12
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7714..8499
DNA (786bp) protein (262aa)
Creatininase Tax=Clostridium sp. D5 RepID=F0YZD6_9CLOT
Creatininase {ECO:0000313|EMBL:EGB92791.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
creatininase
PLM1_60_b1_redo_sep16_scaffold_574_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8604..8921)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN05_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58534.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9000..10229
DNA (1230bp) protein (410aa)
ytsJ; NAD(P)-dependent malic enzyme (EC:1.1.1.38)
NAD(P)-dependent malic enzyme {ECO:0000313|EMBL:AIC14366.1}; EC=1.1.1.38 {ECO:0000313|EMBL:AIC14366.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036572D4
PLM1_60_b1_redo_sep16_scaffold_574_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10382..11728)
DNA (1347bp) protein (449aa)
Natural resistance-associated macrophage protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW20_9ARCH
Mn2+/Fe2-transporter, NRAMP family
Mn2+/Fe2-transporter, NRAMP family {ECO:0000313|EMBL:AIF84569.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_574_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11884..12606)
DNA (723bp) protein (241aa)
Putative cob(II)yrinic acid a,c-diamide reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHI6_NITGG
cob(II)yrinic acid a,c-diamide reductase
Putative cob(II)yrinic acid a,c-diamide reductase {ECO:0000313|EMBL:AFU59400.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12708..13133)
DNA (426bp) protein (142aa)
Putative UspA domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX5_NITGG
UspA domain-containing protein
Putative UspA domain protein {ECO:0000313|EMBL:AFU58486.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_18
unknown

Not on your lists

comp(13285..13635)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_574_19
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14028..15344)
DNA (1317bp) protein (439aa)
glyA; serine/glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_00051};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Serine hydroxymethyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INY7_NITGG
PLM1_60_b1_redo_sep16_scaffold_574_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15433..15669
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILX9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83310.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_574_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(15759..16202)
DNA (444bp) protein (148aa)
30S ribosomal protein S9p Tax=Candidatus Nitrososphaera gargensis RepID=K0IJH2_NITGG
rps9p; 30S ribosomal protein S9p
30S ribosomal protein S9p {ECO:0000313|EMBL:AFU59318.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(16195..16677)
DNA (483bp) protein (161aa)
R-protein L13p (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=E0A1H4_9ARCH
R-protein L13p {ECO:0000313|EMBL:ADK26030.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
rpl13p; 50S ribosomal protein L13p
PLM1_60_b1_redo_sep16_scaffold_574_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(16670..17017)
DNA (348bp) protein (116aa)
50S ribosomal protein L18e Tax=Candidatus Nitrososphaera gargensis RepID=K0ID54_NITGG
ribosomal protein L18E
Ribosomal protein L18E {ECO:0000313|EMBL:AIF83405.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_574_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17059..17718)
DNA (660bp) protein (220aa)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit (EC:2.7.7.6)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit {ECO:0000313|EMBL:AIF83406.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AIF83406.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
DNA-directed RNA polymerase subunit D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB5_NITGG
PLM1_60_b1_redo_sep16_scaffold_574_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17833..18306
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL97_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59382.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_26
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18306..18536
DNA (231bp) protein (77aa)
DNA topoisomerase Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EDJ5_PYRF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17196.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_574_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(18562..20208)
DNA (1647bp) protein (549aa)
Archaeal thermosome Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEG7_NITGG
thsA4; archaeal thermosome
Archaeal thermosome {ECO:0000313|EMBL:AFU59736.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(20294..20776)
DNA (483bp) protein (161aa)
50S ribosomal protein L11 Tax=Candidatus Nitrososphaera gargensis RepID=K0INP7_NITGG
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_574_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(20829..21494)
DNA (666bp) protein (222aa)
Transcription elongation factor Spt5 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH71_NITGG
nusG; transcription antitermination protein NusG
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_574_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21929..22963
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL82_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59362.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 35 in total

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