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PLM1_60_b1_redo_sep16_scaffold_966

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_966_1
unknown

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3..905
DNA (903bp) protein (301aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_966_2
unknown

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comp(1408..1575)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_966_3
unknown

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1887..2207
DNA (321bp) protein (107aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_966_4

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2527..2880
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKU6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24956.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_966_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3439..3717
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
Deoxyribonuclease/rho motif-related TRAM domain containing protein
Deoxyribonuclease/rho motif-related TRAM domain containing protein {ECO:0000313|EMBL:AIC14554.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_966_6
unknown

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comp(4354..4524)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_966_7
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(4987..5181)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AVX0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFM16207.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
conserved exported protein of unknown function
PLM1_60_b1_redo_sep16_scaffold_966_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5645..5947)
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60115.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_966_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6177..6497)
DNA (321bp) protein (107aa)
Aspartate carbamoyltransferase regulatory chain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM94_NITGG
aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_966_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(6802..7632)
DNA (831bp) protein (277aa)
short-chain alcohol dehydrogenase (EC:1.1.1.-)
short-chain dehydrogenase/reductase SDR bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM1_60_b1_redo_sep16_scaffold_966_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7795..10173
DNA (2379bp) protein (793aa)
Amino acid permease Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIT1_NITGG
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AFU59865.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_966_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10410..12809
DNA (2400bp) protein (800aa)
Putative iron/lead transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8R4_NITGG
iron/lead transporter
Putative iron/lead transporter {ECO:0000313|EMBL:AFU57666.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_966_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12954..13400
DNA (447bp) protein (149aa)
Putative iron (Metal) dependent repressor, DtxR family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJG0_NITGG
putative iron (metal) dependent repressor, DtxR family
Putative iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:AIC14969.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_966_14
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13478..14572
DNA (1095bp) protein (365aa)
Putative cell surface protein/ lipoprotein Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XIK6_METNJ
cell surface protein/lipoprotein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84225.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
PLM1_60_b1_redo_sep16_scaffold_966_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14619..15788)
DNA (1170bp) protein (390aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU58582.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_966_16
Bos taurus, Bos, Mammalia, Chordata, Metazoa

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16396..17646
DNA (1251bp) protein (417aa)
PREDICTED: dentin sialophosphoprotein Tax=Orcinus orca RepID=UPI0002BCF8B8
Dentin sialophosphoprotein {ECO:0000313|EMBL:ACN91276.1}; Flags: Fragment;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.;" source="Bos taurus (Bovine).;"
cell wall surface adhesion protein
PLM1_60_b1_redo_sep16_scaffold_966_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17745..18545
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG91_NITGG
alpha/beta fold family hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFU60421.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_966_18
Nomascus leucogenys, Nomascus, Primates, Mammalia, Chordata, Metazoa

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18710..21244
DNA (2535bp) protein (845aa)
PREDICTED: uncharacterized protein LOC100580167 isoform 1 Tax=Nomascus leucogenys RepID=UPI00020AC4CC
Uncharacterized protein {ECO:0000313|Ensembl:ENSNLEP00000011653}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus.;" source="Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates; leucogenys).;"
PLM1_60_b1_redo_sep16_scaffold_966_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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21574..21900
DNA (327bp) protein (109aa)
NHL repeat containing protein bin=GWB2_Ignavibacteria_35_12 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
NHL repeat containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying 19 items

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