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PLM1_60_b1_redo_sep16_scaffold_1116

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1116_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2..241)
DNA (240bp) protein (80aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF83393.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1116_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(799..3204)
DNA (2406bp) protein (802aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDC8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59401.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3427..3798)
DNA (372bp) protein (124aa)
Putative nickel-responsive regulator 1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBN4_NITGG
putative nickel-responsive regulator 1
Putative nickel-responsive regulator 1 {ECO:0000313|EMBL:AIC16360.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1116_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4334..5296
DNA (963bp) protein (321aa)
ABC uptake transporter, substrate-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILU7_NITGG
ABC uptake transporter, substrate-binding protein
ABC uptake transporter, substrate-binding protein {ECO:0000313|EMBL:AFU59682.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5284..6051
DNA (768bp) protein (256aa)
ABC uptake transporter, ATP-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IED0_NITGG
ABC uptake transporter, ATP-binding protein
ABC uptake transporter, ATP-binding protein {ECO:0000313|EMBL:AFU59681.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6051..6893
DNA (843bp) protein (281aa)
ABC uptake transporter, permease protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID3_NITGG
ABC uptake transporter permease
ABC uptake transporter, permease protein {ECO:0000313|EMBL:AFU59680.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_7
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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comp(7042..8553)
DNA (1512bp) protein (504aa)
BNR/Asp-box repeat domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9H1_NITGG
BNR/Asp-box repeat-containing protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM1_60_b1_redo_sep16_scaffold_1116_8
unknown

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comp(8883..9218)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1116_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9205..9714)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIC0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58708.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9756..10184)
DNA (429bp) protein (143aa)
Uncharacterized protein family UPF0201 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN40_NITGG
hypothetical protein
Uncharacterized protein family UPF0201 {ECO:0000313|EMBL:AFU58709.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10237..10926)
DNA (690bp) protein (230aa)
30S ribosomal protein S3ae Tax=Candidatus Nitrososphaera gargensis RepID=K0IFZ8_NITGG
rps3ae; 30S ribosomal protein S3ae
R-protein S3ae {ECO:0000313|EMBL:ADK25997.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM1_60_b1_redo_sep16_scaffold_1116_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(11558..12526)
DNA (969bp) protein (323aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM1_60_b1_redo_sep16_scaffold_1116_13
unknown

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12614..12838
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1116_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13036..13401
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84823.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1116_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13603..14526)
DNA (924bp) protein (308aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INJ6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59489.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14895..16826
DNA (1932bp) protein (644aa)
Putative ATP-dependent DNA helicase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKC6_NITGG
ATP-dependent DNA helicase
Putative ATP-dependent DNA helicase {ECO:0000313|EMBL:AFU58827.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17189..17608
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEJ2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58170.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1116_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17906..19660)
DNA (1755bp) protein (585aa)
DNA polymerase X family (EC:2.7.7.7)
DNA polymerase X family {ECO:0000313|EMBL:AFU60427.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AFU60427.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
DNA polymerase X family Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMN1_NITGG
PLM1_60_b1_redo_sep16_scaffold_1116_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19841..20095
DNA (255bp) protein (85aa)
Radical SAM domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBR9_NITGG
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:AFU58706.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying 19 items

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