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PLM1_60_b1_redo_sep16_scaffold_1480

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1480_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..176
DNA (174bp) protein (58aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH dehydrogenase subunit B {ECO:0000313|EMBL:AIF84605.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF84605.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
NADH-quinone oxidoreductase subunit B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW9_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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178..750
DNA (573bp) protein (191aa)
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C {ECO:0000313|EMBL:AFU58094.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58094.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit C Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ2_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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761..1918
DNA (1158bp) protein (386aa)
nuoD1; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D {ECO:0000313|EMBL:AFU58095.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58095.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE89_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_4
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2018..3283
DNA (1266bp) protein (422aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH dehydrogenase subunit H {ECO:0000313|EMBL:AIF84602.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF84602.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
NADH-quinone oxidoreductase subunit H Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U2_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3280..3777
DNA (498bp) protein (166aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000313|EMBL:AFU58097.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58097.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit I Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY7_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3770..4294
DNA (525bp) protein (175aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:AIC15393.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIC15393.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
NADH-quinone oxidoreductase subunit J Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4278..4580
DNA (303bp) protein (101aa)
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K {ECO:0000313|EMBL:AFU58099.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58099.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit K Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ4_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4605..6317
DNA (1713bp) protein (571aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:AFU58100.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58100.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit M Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE98_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_9
unknown

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6314..6436
DNA (123bp) protein (41aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1480_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6433..8511
DNA (2079bp) protein (693aa)
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:AFU58101.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58101.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit L Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8526..10034
DNA (1509bp) protein (503aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000313|EMBL:AFU58102.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58102.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit N Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
PLM1_60_b1_redo_sep16_scaffold_1480_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10110..10793)
DNA (684bp) protein (228aa)
Putative phosphoribosyl transferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW6_NITGG
phosphoribosyl transferase
Putative phosphoribosyl transferase {ECO:0000313|EMBL:AFU58339.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1480_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11389..12687
DNA (1299bp) protein (433aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
putative quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AIC14760.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1480_14
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12777..13367)
DNA (591bp) protein (197aa)
DNA protection protein DPS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI4_NITGG
dps3; ferritin, Dps family protein
Ferritin, Dps family protein {ECO:0000313|EMBL:AIC16275.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_1480_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13524..13808
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDV7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83107.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1480_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13910..15538
DNA (1629bp) protein (543aa)
ABC-1 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II14_NITGG
ABC-1 domain-containing protein
ABC-1 domain-containing protein {ECO:0000313|EMBL:AFU59565.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1480_17
unknown

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15860..16072
DNA (213bp) protein (71aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1480_18
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16389..16862
DNA (474bp) protein (158aa)
pyridoxamine 5'-phosphate oxidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative flavin-nucleotide-binding protein
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:AIF82345.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1480_19
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(17014..17571)
DNA (558bp) protein (186aa)
Hemolysin-type calcium-binding region Tax=Ochrobactrum RepID=C4WNP0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KEI68022.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1480_20
unknown

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17779..18183
DNA (405bp) protein (135aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1480_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18237..18785)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57229.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1480_22
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18908..20077)
DNA (1170bp) protein (390aa)
Putative NHL repeat containing protein Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GC18_DESGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB47302.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
PLM1_60_b1_redo_sep16_scaffold_1480_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20245..21090)
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84880.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_1480_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21578..22135)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEM6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57228.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_1480_25

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comp(22362..23084)
DNA (723bp) protein (241aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG6N3 RepID=B3T9D7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFM20259.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
PLM1_60_b1_redo_sep16_scaffold_1480_26
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23202..26195
DNA (2994bp) protein (998aa)
Copper resistance family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG1_NITGG
putative copper export protein
Putative copper export protein {ECO:0000313|EMBL:AIF84887.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Displaying 26 items

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