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PLM1_60_b1_redo_sep16_scaffold_2202

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2202_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..144
DNA (144bp) protein (48aa)
Putative blue (Type 1) copper domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH4_NITGG
blue (Type 1) copper domain protein
Putative blue (Type 1) copper domain protein {ECO:0000313|EMBL:AFU59487.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2202_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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182..646
DNA (465bp) protein (155aa)
Putative cytochrome oxidase assembly protein CtaA Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJT7_NITGG
ctaA2; cytochrome oxidase assembly protein CtaA
Putative cytochrome oxidase assembly protein CtaA {ECO:0000313|EMBL:AFU59488.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2202_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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691..1629
DNA (939bp) protein (313aa)
iron-containing alcohol dehydrogenase (EC:1.1.1.1)
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:AFU59490.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU59490.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Iron-containing alcohol dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHS4_NITGG
PLM1_60_b1_redo_sep16_scaffold_2202_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1934..2503
DNA (570bp) protein (190aa)
Putative polyketide cyclase/dehydrase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDL7_NITGG
polyketide cyclase/dehydrase
Putative polyketide cyclase/dehydrase {ECO:0000313|EMBL:AFU59491.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2202_trna_1
unknown

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2615..2704
DNA (90bp)
transferRNA Lys
PLM1_60_b1_redo_sep16_scaffold_2202_5
unknown

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comp(2993..4384)
DNA (1392bp) protein (464aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2202_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4770..5273)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL00_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60078.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2202_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5660..6232)
DNA (573bp) protein (191aa)
Putative uncharacterized protein Tax=uncultured bacterium RepID=C6KTL0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83208.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM1_60_b1_redo_sep16_scaffold_2202_8

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comp(6423..7037)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AWX4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD54204.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2202_9
unknown

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comp(7503..7631)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2202_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7828..8727
DNA (900bp) protein (300aa)
arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase (EC:3.5.3.1)
Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase {ECO:0000313|EMBL:AIF83052.1}; EC=3.5.3.1 {ECO:0000313|EMBL:AIF83052.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Putative Arginase family protein 2 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P2P6_STRVR
PLM1_60_b1_redo_sep16_scaffold_2202_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9078..9347
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59218.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2202_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10010..10843)
DNA (834bp) protein (278aa)
short-chain dehydrogenase of unknown substrate specificity
Uncharacterized protein {ECO:0000313|EMBL:AIF85219.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
short-chain dehydrogenase/reductase SDR bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM1_60_b1_redo_sep16_scaffold_2202_13
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(11243..12166)
DNA (924bp) protein (308aa)
luciferase-like monooxygenase bin=bin9_gal15 species=Frankia sp. Iso899 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
luciferase-like protein
Tax=CSP1_3_Armatimonadetes
PLM1_60_b1_redo_sep16_scaffold_2202_14
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12297..12818)
DNA (522bp) protein (174aa)
Nucleoside-triphosphatase MSWHS_1466 {ECO:0000256|HAMAP-Rule:MF_00796}; Short=NTPase {ECO:0000256|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000256|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00796}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
Nucleoside-triphosphatase THEP1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=NTPTH_METAC
putative NTPase
PLM1_60_b1_redo_sep16_scaffold_2202_15
unknown

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13289..13759
DNA (471bp) protein (157aa)

This feature has no annotations

Displaying 16 items

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