ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2752

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2752_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19..1098
DNA (1080bp) protein (360aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AIF84197.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AIF84197.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
UDP-n-acetylglucosamine 2-epimerase Tax=Pyrococcus furiosus RepID=I6UP71_9EURY
PLM1_60_b1_redo_sep16_scaffold_2752_2
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1264..1980
DNA (717bp) protein (239aa)
Methionine biosynthesis protein MetW bin=GWB2_Elusimicrobia_63_16 species=SAR116 cluster alpha proteobacterium HIMB100 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
methionine biosynthesis protein MetW
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
PLM1_60_b1_redo_sep16_scaffold_2752_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2078..2965)
DNA (888bp) protein (296aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15112.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_2752_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3203..4165)
DNA (963bp) protein (321aa)
Putative nucleotide sugar epimerase/dehydratase Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWM3_METPS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
PLM1_60_b1_redo_sep16_scaffold_2752_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4386..5525
DNA (1140bp) protein (380aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15111.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_2752_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5616..6890)
DNA (1275bp) protein (425aa)
asnB1; asparagine synthase (EC:6.3.5.4)
Putative asparagine synthase {ECO:0000313|EMBL:AFU57531.1}; EC=6.3.5.4 {ECO:0000313|EMBL:AFU57531.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative asparagine synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8C8_NITGG
PLM1_60_b1_redo_sep16_scaffold_2752_7
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

7886..9340
DNA (1455bp) protein (485aa)
Tax=RBG_13_Berkelbacteria_40_8_curated
PLM1_60_b1_redo_sep16_scaffold_2752_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9404..10276)
DNA (873bp) protein (291aa)
putative isocitrate lyase/carboxyphosphonoenolpyruvate phosphonomutase (EC:4.1.3.1)
Putative isocitrate lyase /carboxyphosphonoenolpyruvate phosphonomutase {ECO:0000313|EMBL:AIC14641.1}; EC=4.1.3.1 {ECO:0000313|EMBL:AIC14641.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Isocitrate lyase /carboxyphosphonoenolpyruvate phosphonomutase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIC6_NITGG
PLM1_60_b1_redo_sep16_scaffold_2752_9
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10309..10482)
DNA (174bp) protein (58aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBS8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14643.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM1_60_b1_redo_sep16_scaffold_2752_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10574..11908)
DNA (1335bp) protein (445aa)
Putative peptidase M20 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDX3_NITGG
peptidase M20
Putative peptidase M20 {ECO:0000313|EMBL:AFU59581.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM1_60_b1_redo_sep16_scaffold_2752_11
unknown

Not on your lists

comp(12019..12225)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 11 items

View Taxonomy